Whole Brain: Saunders et al 2018 “DropViz”

Search the neuron dataset by Saunders et al: Anatomical region

More information on methods here

Cell-type
Anatomical region
Neurotransmitter
 

 

Heatmap units: mean log2(counts per 10,000 + 1)

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View mean expression per brain region

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Index Metacell ID Tissue Cell Type Class marker Type marker Full name Common name
1 CB_7-1 Cerebellum Astrocyte Gja Slc1a3 Astrocyte.Gja.Slc1a3 Bergmann Glia
2 CB_8-1 Cerebellum Astrocyte Gja1 Gfap Gja1.Gfap Gfap+ astrocytes
3 CB_8-2 Cerebellum Astrocyte Gja1 Htra1 Gja1.Htra1 Gfap- astrocytes
4 CB_9-1 Cerebellum Choroid_Plexus Ttr Ttr Choroid_Plexus.Ttr Choroid_Plexus.Ttr
5 CB_10-1 Cerebellum Endothelial_Stalk Flt1 Mgp Endothelial_Stalk.Flt1.Mgp Endothelial_Stalk.Flt1.Mgp
6 CB_10-2 Cerebellum Endothelial_Stalk Flt1 Car4 Endothelial_Stalk.Flt1.Car4 Endothelial_Stalk.Flt1.Car4
7 CB_10-3 Cerebellum Endothelial_Stalk Flt1 Lrg1 Endothelial_Stalk.Flt1.Lrg1 Endothelial_Stalk.Flt1.Lrg1
8 CB_11-1 Cerebellum Endothelial_Tip Dcn Nnat Endothelial_Tip.Dcn.Nnat Endothelial_Tip.Dcn.Nnat
9 CB_11-2 Cerebellum Endothelial_Tip Dcn Apod Endothelial_Tip.Dcn.Apod Endothelial_Tip.Dcn.Apod
10 CB_5-1 Cerebellum Microglia C1qb Mrc1-Tmem119 Microglia.C1qb.Mrc1-Tmem119 Resident macrophage
11 CB_11-3 Cerebellum Mural Acta2Rgs5 Acta2 Mural.Acta2Rgs5.Acta2 Mural.Acta2Rgs5.Acta2
12 CB_11-4 Cerebellum Mural Acta2Rgs5 Kcnj8 Mural.Acta2Rgs5.Kcnj8 Mural.Acta2Rgs5.Kcnj8
13 CB_11-5 Cerebellum Mural Acta2Rgs5 Rgs5 Mural.Acta2Rgs5.Rgs5 Mural.Acta2Rgs5.Rgs5
14 CB_6-1 Cerebellum Oligodendrocyte Trf Il33 Oligodendroyte.Trf.Il33 Oligodendroyte.Trf.Il33
15 CB_6-2 Cerebellum Oligodendrocyte Trf Klk6 Oligodendrocyte.Trf.Klk6 Oligodendrocyte.Trf.Klk6
16 CB_6-3 Cerebellum Polydendrocyte Tnr Tnr Polydendrocyte.Tnr.Tnr Polydendrocyte.Tnr.Tnr
17 CB_1-1 Cerebellum Neuron Cerebellum Slc17a7 Gabra6 Neuron.Slc17a7.Gabra6 Granule cells
18 CB_2-1 Cerebellum Neuron Cerebellum Gad1Gad2 Pcp2 Neuron.Gad1Gad2.Pcp2 Purkinje Neurons
19 CB_3-1 Cerebellum Neuron Cerebellum Gad1Gad2 Pvalb-Nefh Neuron.Gad1Gad2.Pvalb-Nefh Cerebellum basket cells 1
20 CB_3-2 Cerebellum Neuron Cerebellum Gad1Gad2 Pvalb-Rab3b Neuron.Gad1Gad2.Pvalb-Rab3b Cerebellum basket cells 2
21 CB_3-3 Cerebellum Neuron Cerebellum Gad1Gad2 Pvalb-Cadm1 Neuron.Gad1Gad2.Pvalb-Cadm1 Cerebellum basket cells 3
22 CB_3-4 Cerebellum Neuron Cerebellum Gad1Gad2 Pvalb – Chrm2 Neuron.Gad1Gad2.Pvalb-Chrm2 Cerebellum basket cells 4
23 CB_4-1 Cerebellum Neuron Cerebellum Slc17a6 Sln Neuron.Slc17a6.Sln Unipolar brush cell
24 CB_4-2 Cerebellum Neuron Cerebellum Gad1Gad2 Lgi2 Neuron.Gad1Gad2.Lgi2 Golgi interneuron
25 CB_4-3 Cerebellum Neuron Cerebellum Slc17a6 Nrgn Neuron.Slc17a6.Nrgn Inferior colliculus
26 FC_8-1 Frontal Cortex Astrocyte Gja1   Astrocyte.Gja1 Gfap- astrocytes
27 FC_8-2 Frontal Cortex Astrocyte Gja1 Myoc Astrocyte.Gja1.Myoc Gfap+ astrocytes
28 FC_12-1 Frontal Cortex Endothelial_Stalk Flt1 Gkn3 Endothelial_Stalk.Flt1.Gkn3 Endothelial_Stalk.Flt1.Gkn3
29 FC_12-2 Frontal Cortex Endothelial_Stalk Flt1 Mgp Endothelial_Stalk.Flt1.Mgp Endothelial_Stalk.Flt1.Mgp
30 FC_12-3 Frontal Cortex Endothelial_Stalk Flt1 Car4 Endothelial_Stalk.Flt1.Car4 Endothelial_Stalk.Flt1.Car4
31 FC_12-4 Frontal Cortex Endothelial_Stalk Flt1 Cfh Endothelial_Stalk.Flt1.Cfh Endothelial_Stalk.Flt1.Cfh
32 FC_12-5 Frontal Cortex Endothelial_Stalk Flt1 Lrg1 Endothelial_Stalk.Flt1.Lrg1 Endothelial_Stalk.Flt1.Lrg1
33 FC_14-1 Frontal Cortex Endothelial_Tip Dcn 1500015O10Rik Endothelial_Tip.Dcn.1500015O10Rik Endothelial_Tip.Dcn.1500015O10Rik
34 FC_14-2 Frontal Cortex Endothelial_Tip Dcn Dapl1 Endothelial_Tip.Dcn.Dapl1 Endothelial_Tip.Dcn.Dapl1
35 FC_14-3 Frontal Cortex Endothelial_Tip Dcn Coch Endothelial_Tip.Dcn.Coch Endothelial_Tip.Dcn.Coch
36 FC_14-4 Frontal Cortex Endothelial_Tip Dcn Col15a1 Endothelial_Tip.Dcn.Col15a1 Endothelial_Tip.Dcn.Col15a1
37 FC_14-5 Frontal Cortex Endothelial_Tip Dcn Inmt Endothelial_Tip.Dcn.Inmt Endothelial_Tip.Dcn.Inmt
38 FC_11-3 Frontal Cortex Macrophage C1qb Mrc1 Macrophage.C1qb.Mrc1 Resident macrophage
39 FC_11-1 Frontal Cortex Microglia C1qb Tmem119 Microglia.C1qb.Tmem119 Microglia.C1qb.Tmem119
40 FC_11-4 Frontal Cortex Microglia C1qb Tmem119-Fos Microglia.C1qb.Tmem119-Fos Microglia.C1qb.Tmem119-Fos
41 FC_13-1 Frontal Cortex Mural Rgs5Acta2 Cnn1 Mural.Rgs5Acta2.Cnn1 Mural.Rgs5Acta2.Cnn1
42 FC_13-2 Frontal Cortex Mural Rgs5Acta2 Ccnd1 Mural.Rgs5Acta2.Ccnd1 Mural.Rgs5Acta2.Ccnd1
43 FC_13-3 Frontal Cortex Mural Rgs5Acta2 Abcc9 Mural.Rgs5Acta2.Abcc9 Mural.Rgs5Acta2.Abcc9
44 FC_13-4 Frontal Cortex Mural Rgs5Acta2 Col3a1 Mural.Rgs5Acta2.Col3a1 Mural.Rgs5Acta2.Col3a1
45 FC_9-1 Frontal Cortex Oligodendrocyte Tnf Igsf8 Oligodendrocyte.Tnf.Igsf8 Oligodendrocyte.Tnf.Igsf8
46 FC_9-2 Frontal Cortex Oligodendrocyte Tnf Igsf8-Ctps Oligodendrocyte.Tnf.Igsf8-Ctps Oligodendrocyte.Tnf.Igsf8-Ctps
47 FC_9-3 Frontal Cortex Oligodendrocyte Tnf Kif5b Oligodendrocyte.Tnf.Kif5b Oligodendrocyte.Tnf.Kif5b
48 FC_9-4 Frontal Cortex Oligodendrocyte Tnf Ptgds Oligodendrocyte.Tnf.Ptgds Oligodendrocyte.Tnf.Ptgds
49 FC_9-5 Frontal Cortex Oligodendrocyte Tnf Klk6 Oligodendrocyte.Tnf.Klk6 Oligodendrocyte.Tnf.Klk6
50 FC_10-1 Frontal Cortex Polydendrocyte Tnr Cspg5 Polydendrocyte.Tnr.Cspg5 Polydendrocyte.Tnr.Cspg5
51 FC_10-2 Frontal Cortex Polydendrocyte Tnr Dlx1 Polydendrocyte.Tnr.Dlx1 Polydendrocyte.Tnr.Dlx1
52 FC_10-3 Frontal Cortex Polydendrocyte Tnr Pdgfa Polydendrocyte.Tnr.Pdgfa Polydendrocyte.Tnr.Pdgfa
53 FC_10-4 Frontal Cortex Polydendrocyte Tnr Opalin Polydendrocyte.Tnr.Opalin Polydendrocyte.Tnr.Opalin
54 FC_10-5 Frontal Cortex Polydendrocyte Tnr Bmp4- Ptgds Polydendrocyte.Tnr.Bmp4- Ptgds Polydendrocyte.Tnr.Bmp4- Ptgds
55 FC_10-6 Frontal Cortex Polydendrocyte Tnr Bmp4-Gpr17 Polydendrocyte.Tnr.Bmp4-Gpr17 Polydendrocyte.Tnr.Bmp4-Gpr17
56 FC_1-1 Frontal Cortex Neuron Frontal Cortex Gad1Gad2 Cplx3-Npy Neuron.Gad1Gad2.Cplx3 Neuron.Gad1Gad2.Cplx3
57 FC_1-10 Frontal Cortex Neuron Frontal Cortex Gad1Gad2-Slc17a8 Synpr-Sncg-Yjefn3 Neuron.Gad1Gad2-Slc17a8.Synpr-Sncg-Yjefn3 Neuron.Gad1Gad2-Slc17a8.Synpr-Sncg-Yjefn3
58 FC_1-11 Frontal Cortex Neuron Frontal Cortex Gad1Gad2 Synpr-Sncg Neuron.Gad1Gad2.Synpr-Sncg Neuron.Gad1Gad2.Synpr-Sncg
59 FC_1-2 Frontal Cortex Neuron Frontal Cortex Gad1Gad2 Cplx3-Reln Neuron.Gad1Gad2.Cplx3-Reln Neuron.Gad1Gad2.Cplx3-Reln
60 FC_1-3 Frontal Cortex Neuron Frontal Cortex Gad1Gad2 Synpr-Nnat Neuron.Gad1Gad2.Synpr-Nnat Neuron.Gad1Gad2.Synpr-Nnat
61 FC_1-4 Frontal Cortex Neuron Frontal Cortex Gad1Gad2 Synpr-Crispld2 Neuron.Gad1Gad2.Synpr-Crispld2 Neuron.Gad1Gad2.Synpr-Crispld2
62 FC_1-5 Frontal Cortex Neuron Frontal Cortex Gad1Gad2-Chat Synpr-Slc5a7 Neuron.Gad1Gad2-Chat.Synpr-Slc5a7 Cholinergic cortical  interneurons
63 FC_1-6 Frontal Cortex Neuron Frontal Cortex Gad1Gad2 Synpr-Pcdh11x Neuron.Gad1Gad2.Synpr-Pcdh11x Neuron.Gad1Gad2.Synpr-Pcdh11x
64 FC_1-7 Frontal Cortex Neuron Frontal Cortex Gad1Gad2 Synpr-Dpy19l1 Neuron.Gad1Gad2.Synpr-Dpy19l1 Neuron.Gad1Gad2.Synpr-Dpy19l1
65 FC_1-8 Frontal Cortex Neuron Frontal Cortex Gad1Gad2 Cplx3-Dpy19l1 Neuron.Gad1Gad2.Cplx3-Dpy19l1 Neuron.Gad1Gad2.Cplx3-Dpy19l1
66 FC_1-9 Frontal Cortex Neuron Frontal Cortex Gad1Gad2 Cplx3-Crim1 Neuron.Gad1Gad2.Cplx3-Crim1 Neuron.Gad1Gad2.Cplx3-Crim1
67 FC_11-2 Frontal Cortex Neuron Frontal Cortex Slc17a6 Reln Neuron.Slc17a6.Reln Cajal-Retzius
68 FC_2-1 Frontal Cortex Neuron Frontal Cortex Gad1Gad2 Sst-Chodl Neuron.Gad1Gad2.Sst-Chodl MGE-derived cortical interneurons–Long-range-projecting interneurons
69 FC_2-10 Frontal Cortex Neuron Frontal Cortex Gad1Gad2-Th Nr4a2 Neuron.Gad1Gad2-Th.Nr4a2 MGE-derived cortical interneurons
70 FC_2-2 Frontal Cortex Neuron Frontal Cortex Gad1Gad2 Sst-Pdyn Neuron.Gad1Gad2.Sst-Pdyn MGE-derived cortical interneurons–Martinotti cells
71 FC_2-3 Frontal Cortex Neuron Frontal Cortex Gad1Gad2 Sst-Calb2 Neuron.Gad1Gad2.Sst-Calb2 MGE-derived cortical interneurons–Martinotti cells
72 FC_2-4 Frontal Cortex Neuron Frontal Cortex Gad1Gad2 Sst-Crh Neuron.Gad1Gad2.Sst-Crh MGE-derived cortical interneurons–Martinotti cells
73 FC_2-5 Frontal Cortex Neuron Frontal Cortex Gad1Gad2 Sst-Nr2f2 Neuron.Gad1Gad2.Sst-Nr2f2 MGE-derived cortical interneurons–Martinotti cells
74 FC_2-6 Frontal Cortex Neuron Frontal Cortex Gad1Gad2 Pvalb-Unc5b Neuron.Gad1Gad2.Pvalb-Unc5b MGE-derived cortical interneurons–Chandelier cells
75 FC_2-7 Frontal Cortex Neuron Frontal Cortex Gad1Gad2 Pvalb Neuron.Gad1Gad2.Pvalb MGE-derived cortical interneurons–basket cells
76 FC_2-8 Frontal Cortex Neuron Frontal Cortex Gad1Gad2 Pvalb-Nefm Neuron.Gad1Gad2.Pvalb-Nefm MGE-derived cortical interneurons–basket cells
77 FC_2-9 Frontal Cortex Neuron Frontal Cortex Gad1Gad2 Pvalb-Necab1 Neuron.Gad1Gad2.Pvalb-Necab1 MGE-derived cortical interneurons–basket cells
78 FC_3-1 Frontal Cortex Neuron Frontal Cortex Slc17a7 Syt6-Sema5a Neuron.Slc17a7.Syt6-Sema5a Deep layer pyramidal cells
79 FC_3-10 Frontal Cortex Neuron Frontal Cortex Slc17a7-Slc17a8 Syt6-Cplx3 Neuron.Slc17a7-Slc17a8.Syt6-Cplx3 Deep layer pyramidal cells–Cortical Subplate
80 FC_3-11 Frontal Cortex Neuron Frontal Cortex Slc17a7 Syt6-Bdnf Neuron.Slc17a7.Syt6-Bdnf Deep layer pyramidal cells
81 FC_3-12 Frontal Cortex Neuron Frontal Cortex Slc17a7 Syt6-Kit Neuron.Slc17a7.Syt6-Kit Deep layer pyramidal cells
82 FC_3-13 Frontal Cortex Neuron Frontal Cortex Slc17a7 Syt6-Fos Neuron.Slc17a7.Syt6-Fos Deep layer pyramidal cells (IEG)
83 FC_3-2 Frontal Cortex Neuron Frontal Cortex Slc17a7 Syt6-Etv1 Neuron.Slc17a7.Syt6-Etv1 Deep layer pyramidal cells-Etv1 typically marks layer 5b, but some expression in layer 6, especially in medial regions like cingulate
84 FC_3-3 Frontal Cortex Neuron Frontal Cortex Slc17a7 Syt6-Efna5 Neuron.Slc17a7.Syt6-Efna5 Deep layer pyramidal cells
85 FC_3-4 Frontal Cortex Neuron Frontal Cortex Slc17a7 Syt6-Cyp26b1 Neuron.Slc17a7.Syt6-Cyp26b1 Deep layer pyramidal cells
86 FC_3-5 Frontal Cortex Neuron Frontal Cortex Slc17a7 Syt6-Slc30a3 Neuron.Slc17a7.Syt6-Slc30a3 Deep layer pyramidal cells
87 FC_3-6 Frontal Cortex Neuron Frontal Cortex Slc17a7 Syt6-Slc24a2 Neuron.Slc17a7.Syt6-Slc24a2 Deep layer pyramidal cells
88 FC_3-7 Frontal Cortex Neuron Frontal Cortex Slc17a7 Syt6-Lypd1 Neuron.Slc17a7.Syt6-Lypd1 Deep layer pyramidal cells–medial-lateral spatial gradient
89 FC_3-8 Frontal Cortex Neuron Frontal Cortex Slc17a7-Slc17a6 Syt6-Nnat NeuronSlc17a7-Slc17a6.Syt6-Nnat Deep layer pyramidal cells–medial cortex
90 FC_3-9 Frontal Cortex Neuron Frontal Cortex Slc17a7 Syt6-Sema3c Neuron.Slc17a7.Syt6-Sema3c Deep layer pyramidal cells
91 FC_4-1 Frontal Cortex Neuron Frontal Cortex Slc17a6-Slc17a7-Slc17a8 Fezf2.Slc17a8 Neuron.Slc17a6-Slc17a7-Slc17a8.Fezf2.Slc17a8 Deep layer pyramidal cells-Layer 5b
92 FC_4-2 Frontal Cortex Neuron Frontal Cortex Slc17a6-Slc17a7 Fezf2.3110035E14Rik Neuron.Slc17a6-Slc17a7.Fezf2.3110035E14Rik Deep layer pyramidal cells-Layer 5b
93 FC_5-1 Frontal Cortex Neuron Frontal Cortex Slc17a6-Slc17a7 Nr4a2 Neuron.Slc17a6-Slc17a7.Nr4a2 Claustrum
94 FC_6-1 Frontal Cortex Neuron Frontal Cortex Slc17a7 Nptxr-Calb1 Neuron.Slc17a7.Nptxr-Calb1 Superficial layer pyramidal cells–Layer 2/3
95 FC_6-2 Frontal Cortex Neuron Frontal Cortex Slc17a7 Nptxr-Ndst4 Neuron.Slc17a7.Nptxr-Ndst4 Superficial layer pyramidal cells–dorsal endopiriform nucleus or piriform cortex
96 FC_6-3 Frontal Cortex Neuron Frontal Cortex Slc17a7-Slc17a6 Nptxr-Rorb Neuron.Slc17a7-Slc17a6.Nptxr-Rorb Deep layer pyramidal cells–Layer 5a
97 FC_6-4 Frontal Cortex Neuron Frontal Cortex Slc17a7 Nptxr-Deptor Neuron.Slc17a7.Nptxr-Deptor Deep layer pyramidal cells–Layer 5a
98 FC_6-5 Frontal Cortex Neuron Frontal Cortex Slc17a7 Nptxr-Fos Neuron.Slc17a7.Nptxr-Fos Deep layer pyramidal cells (IEG)
99 FC_6-6 Frontal Cortex Neuron Frontal Cortex Slc17a7 Nptxr-Drd1 Neuron.Slc17a7.Nptxr-Drd1 Deep layer pyramidal cells
100 FC_7-1 Frontal Cortex Neuron Frontal Cortex Slc17a7 Parm1.Ndnf Neuron.Slc17a7.Parm1.Ndnf Deep layer pyramidal cells–layer 5
101 FC_7-2 Frontal Cortex Neuron Frontal Cortex Slc17a7 Parm1.Nnat Neuron.Slc17a7.Parm1.Nnat Deep layer pyramidal cells–layer 5
102 FC_7-3 Frontal Cortex Neuron Frontal Cortex Slc17a7 Parm1.Lsamp Neuron.Slc17a7.Parm1.Lsamp Deep layer pyramidal cells–layer 5
103 FC_7-4 Frontal Cortex Neuron Frontal Cortex Slc17a7 Parm1.Fos Neuron.Slc17a7.Parm1.Fos Deep layer pyramidal cells–layer 5 (IEG)
104 FC_7-5 Frontal Cortex Neuron Frontal Cortex Slc17a7 Parm1.Cadm2 Neuron.Slc17a7.Parm1.Cadm2 Deep layer pyramidal cells–layer 5
105 FC_7-6 Frontal Cortex Neuron Frontal Cortex Slc17a7 Parm1.Nefm Neuron.Slc17a7.Parm1.Nefm Deep layer pyramidal cells–layer 5
106 FC_7-7 Frontal Cortex Neuron Frontal Cortex Slc17a7 Parm1.Tshz2 Neuron.Slc17a7.Parm1.Tshz2 Deep layer pyramidal cells–layer 5
107 PC_8-1 Posterior Cortex Astrocyte Gja1 Htra1 Astrocyte.Gja1.Igfbp2 Astrocyte.Gja1.Igfbp2
108 PC_8-2 Posterior Cortex Astrocyte Gja1 Myoc Astrocyte.Gja1.Myoc Astrocyte.Gja1.Myoc
109 PC_8-3 Posterior Cortex Astrocyte Gja1 Sparc Astrocyte.Gja1.Sparc Astrocyte.Gja1.Sparc
110 PC_12-1 Posterior Cortex Endothelial_Stalk Flt1 Car4 Endothelial_Stalk.Flt1.Car4 Endothelial_Stalk.Flt1.Car4
111 PC_12-2 Posterior Cortex Endothelial_Stalk Flt1 Vwf Endothelial_Stalk.Flt1.Vwf Endothelial_Stalk.Flt1.Vwf
112 PC_12-3 Posterior Cortex Endothelial_Stalk Flt1 Gm9946 Endothelial_Stalk.Flt1.Gm9946 Endothelial_Stalk.Flt1.Gm9946
113 PC_12-4 Posterior Cortex Endothelial_Stalk Flt1 Gkn3 Endothelial_Stalk.Flt1.Gkn3 Endothelial_Stalk.Flt1.Gkn3
114 PC_14-1 Posterior Cortex Endothelial_Tip Dcn Mgp-Penk Endothelial_Tip.Dcn.Mgp-Penk Endothelial_Tip.Dcn.Mgp-Penk
115 PC_14-2 Posterior Cortex Endothelial_Tip Dcn Mgp-Clu Endothelial_Tip.Dcn.Mgp-Clu Endothelial_Tip.Dcn.Mgp-Clu
116 PC_14-3 Posterior Cortex Endothelial_Tip Dcn Nnat Endothelial_Tip.Dcn.Nnat Endothelial_Tip.Dcn.Nnat
117 PC_14-4 Posterior Cortex Endothelial_Tip Dcn Coch Endothelial_Tip.Dcn.Coch Endothelial_Tip.Dcn.Coch
118 PC_14-5 Posterior Cortex Endothelial_Tip Dcn Inmt Endothelial_Tip.Dcn.Inmt Endothelial_Tip.Dcn.Inmt
119 PC_11-2 Posterior Cortex Macrophage C1qb Mrc1 Macrophage.C1qb.Mrc1 Resident macrophage
120 PC_11-1 Posterior Cortex Microglia C1qb Tmem119 Microglia.C1qb.Tmem119 Microglia.C1qb.Tmem119
121 PC_11-3 Posterior Cortex Microglia C1qb Tmem119-Fos Microglia.C1qb.Tmem119-Fos Microglia
122 PC_11-4 Posterior Cortex Microglia C1qb Tmem119-Junb Microglia.C1qb.Tmem119-Junb Microglia
123 PC_13-1 Posterior Cortex Mural Acta2Rgs5 Acta2 Mural.Acta2Rgs5.Acta2 Mural.Acta2Rgs5.Acta2
124 PC_13-2 Posterior Cortex Mural Acta2Rgs5 Fos Mural.Acta2Rgs5.Fos Mural.Acta2Rgs5.Fos
125 PC_13-3 Posterior Cortex Mural Acta2Rgs5 Rgs5 Mural.Acta2Rgs5Rgs5 Mural.Acta2Rgs5Rgs5
126 PC_13-4 Posterior Cortex Mural Acta2Rgs5 Kcnj8-Abcc9 Mural.Acta2Rgs5.Kcnj8-Abcc9 Mural.Acta2Rgs5.Kcnj8-Abcc9
127 PC_13-5 Posterior Cortex Mural Acta2Rgs5 Abcc9 Mural.Acta2Rgs5.Abcc9 Mural.Acta2Rgs5.Abcc9
128 PC_9-1 Posterior Cortex Oligodendrocyte Tfr Ctps Oligodendrocyte.Tfr.Ctps Oligodendrocyte.Tfr.Ctps
129 PC_9-2 Posterior Cortex Oligodendrocyte Tfr Tmem2 Oligodendrocyte.Tfr.Tmem2 Oligodendrocyte.Tfr.Tmem2
130 PC_9-3 Posterior Cortex Oligodendrocyte Tfr Klk6 Oligodendrocyte.Tfr.Klk6 Oligodendrocyte.Tfr.Klk6
131 PC_9-4 Posterior Cortex Oligodendrocyte Tfr Il33 Oligodendrocyte.Tfr.Il33 Oligodendrocyte.Tfr.Il33
132 PC_9-5 Posterior Cortex Oligodendrocyte Tfr Sez6 Oligodendrocyte.Tfr.Sez6 Oligodendrocyte.Tfr.Sez6
133 PC_10-1 Posterior Cortex Polydendrocyte Tnr Cspg5 Polydendrocyte.Tnr.Cspg5 Polydendrocyte.Tnr.Cspg5
134 PC_10-2 Posterior Cortex Polydendrocyte Tnr Dlx1 Polydendrocyte.Tnr.Dlx1 Polydendrocyte.Tnr.Dlx1
135 PC_10-3 Posterior Cortex Polydendrocyte Tnr Tmsb4x Polydendrocyte.Tnr.Tmsb4x Polydendrocyte.Tnr.Tmsb4x
136 PC_10-4 Posterior Cortex Polydendrocyte Tnr Lims2-Tmsb4x Polydendrocyte.Tnr.Lims2-Tmsb4x Polydendrocyte.Tnr.Lims2-Tmsb4x
137 PC_1-1 Posterior Cortex Neuron Posterior Cortex Slc17a7 Syt6-Cplx3 Neuron.Slc17a7.Syt6-Cplx3 Cortical Subplate pyramidal cells
138 PC_1-2 Posterior Cortex Neuron Posterior Cortex Slc17a7-Slc17a8 Syt6-Lancl3 Neuron.Slc17a7-Slc17a8.Syt6-Lancl3 Cortical Subplate pyramidal cells
139 PC_1-3 Posterior Cortex Neuron Posterior Cortex Slc17a7 Syt6-Tshz2-Nrep Neuron.Slc17a7.Syt6-Tshz2-Nrep Subiculum and Entorhinal Cortex
140 PC_1-4 Posterior Cortex Neuron Posterior Cortex Slc17a7 Syt6-Sla Neuron.Slc17a7.Syt6-Sla Layer6a
141 PC_1-5 Posterior Cortex Neuron Posterior Cortex Slc17a7 Syt6-Nnat Neuron.Slc17a7.Syt6-Nnat Neuron.Slc17a7.Syt6-Nnat
142 PC_1-6 Posterior Cortex Neuron Posterior Cortex Slc17a7 Syt6-Slc24a2 Neuron.Slc17a7.Syt6-Slc24a2 Cadm2+, not selective
143 PC_1-7 Posterior Cortex Neuron Posterior Cortex Slc17a7 Syt6-Tox Neuron.Slc17a7.Syt6-Tox Neuron.Slc17a7.Syt6-Tox
144 PC_1-8 Posterior Cortex Neuron Posterior Cortex Slc17a7 Syt6-Nefm Neuron.Slc17a7.Syt6-Nefm Layer 6a
145 PC_1-9 Posterior Cortex Neuron Posterior Cortex Slc17a7 Syt6-Fos Neuron.Slc17a7.Syt6-Fos IEG+
146 PC_2-1 Posterior Cortex Neuron Posterior Cortex Slc17a7 Calb1-Ddit4l Neuron.Sc17a7.Calb1-Ddit4l Neurofilament, Layer4?
147 PC_2-10 Posterior Cortex Neuron Posterior Cortex Slc17a7-Slc17a6 Rorb-Pcdh20 Neuron.Slc17a7-Slc17a6.Rorb-Pcdh20 Layer 5a 
148 PC_2-11 Posterior Cortex Neuron Posterior Cortex Slc17a7 Rorb-Gpr83 Neuron.Sc17a7.Rorb-Gpr83 Layer 5a 
149 PC_2-12 Posterior Cortex Neuron Posterior Cortex Slc17a7 Fermt1 Neuron.Sc17a7.Fermt1 Subiculum/Parasubiculum
150 PC_2-13 Posterior Cortex Neuron Posterior Cortex Slc17a7-Slc17a6 Calb1-Rorb-Il1rapl2 Neuron.Slc17a7-Slc17a6.Calb1-Rorb-Il1rapl2 Layer 5b
151 PC_2-14 Posterior Cortex Neuron Posterior Cortex Slc17a7-Slc17a6 Tshz2 Neuron.Slc17a7-Slc17a6.Tshz2 Retrosplenial cortex (RSG)/Subiculum/Parasubiculum
152 PC_2-15 Posterior Cortex Neuron Posterior Cortex Slc17a7 Oprk1 Neuron.Sc17a7.Oprk1 Claustrum?
153 PC_2-16 Posterior Cortex Neuron Posterior Cortex Slc17a7 Crym Neuron.Sc17a7.Crym Subiculum
154 PC_2-17 Posterior Cortex Neuron Posterior Cortex Slc17a7 Sema3e-Nnat Neuron.Sc17a7.Sema3e-Nnat Layer 6
155 PC_2-18 Posterior Cortex Neuron Posterior Cortex Slc17a7 Sema3e-Onecut2 Neuron.Sc17a7.Sema3e-Onecut2 Layer 6
156 PC_2-2 Posterior Cortex Neuron Posterior Cortex Slc17a7 Calb1-Tshz2 Neuron.Sc17a7.Calb1-Tshz2 Retrosplenial cortex (RSG)/Entorhinal cortex, Layer 2/3
157 PC_2-3 Posterior Cortex Neuron Posterior Cortex Slc17a7 Tshz2-Smoc1 Neuron.Sc17a7.Tshz2-Smoc1 Agranular Retrosplenial cortex (RSG) (Smoc1+)
158 PC_2-4 Posterior Cortex Neuron Posterior Cortex Slc17a7 Calb1-Fos Neuron.Sc17a7.Calb1-Fos Layer 2/3, IEG+
159 PC_2-5 Posterior Cortex Neuron Posterior Cortex Slc17a7 Calb1-Lpl Neuron.Sc17a7.Calb1-Lpl Layer 2/3 
160 PC_2-6 Posterior Cortex Neuron Posterior Cortex Slc17a7 Calb1-Otof Neuron.Sc17a7.Calb1-Otof Layer 2/3
161 PC_2-7 Posterior Cortex Neuron Posterior Cortex Slc17a7 Calb1-Lpl-Penk Neuron.Sc17a7.Calb1-Lpl-Penk Layer 2/3
162 PC_2-8 Posterior Cortex Neuron Posterior Cortex Slc17a7 Calb1-Lpl-Cadm2 Neuron.Sc17a7.Calb1-Lpl-Cadm2 Layer 2/3, Cadm2+
163 PC_2-9 Posterior Cortex Neuron Posterior Cortex Slc17a7 Rorb-BC006965 Neuron.Sc17a7.Rorb-BC006965 Layer 5a, BC006965+
164 PC_3-1 Posterior Cortex Neuron Posterior Cortex Slc17a7 Bcl6-Cbln1 Neuron.Slc17a7.Bcl6-Cbln1 Layer 5a, entorhinal cortex , Cbln1+
165 PC_3-10 Posterior Cortex Neuron Posterior Cortex Slc17a7 Bcl6-Npnt Neuron.Slc17a7.Bcl6-Npnt Layer 5a
166 PC_3-2 Posterior Cortex Neuron Posterior Cortex Slc17a7 Bcl6-Dditl Neuron.Slc17a7.Bcl6-Dditl Layer 5a
167 PC_3-3 Posterior Cortex Neuron Posterior Cortex Slc17a7 Bcl6-C1ql2 Neuron.Slc17a7.Bcl6-C1ql2 Retrosplenial cortex (RSG), layer 5a
168 PC_3-4 Posterior Cortex Neuron Posterior Cortex Slc17a7 Bcl6-Tcerg1l Neuron.Slc17a7.Bcl6-Tcerg1l Layer 5a
169 PC_3-5 Posterior Cortex Neuron Posterior Cortex Slc17a7 Bcl6-Fos Neuron.Slc17a7.Bcl6-Fos Layer 5a, IEG+
170 PC_3-6 Posterior Cortex Neuron Posterior Cortex Slc17a7 Bcl6-Ndst4 Neuron.Slc17a7.Bcl6-Ndst4 Subiculum
171 PC_3-7 Posterior Cortex Neuron Posterior Cortex Slc17a7 Bcl6-Ptgfr Neuron.Slc17a7.Bcl6-Ptgfr Postsubiculum
172 PC_3-8 Posterior Cortex Neuron Posterior Cortex Slc17a7 Bcl6-Tshz2-Syt2 Neuron.Slc17a7.Bcl6-Tshz2-Syt2 Layer 5a, Entorhinal cortex, Tshz1+
173 PC_3-9 Posterior Cortex Neuron Posterior Cortex Slc17a7 Bcl6-Pvalb Neuron.Slc17a7.Bcl6-Pvalb Layer 5a
174 PC_4-1 Posterior Cortex Neuron Posterior Cortex Gad1Gad2 Cplx3-Reln Neuron.Gad1Gad2.Cplx3-Reln Cortical subplate interneuron
175 PC_4-2 Posterior Cortex Neuron Posterior Cortex Gad1Gad2 Cplx3-Npy Neuron.Gad1Gad2.Cplx3-Npy Cortical subplate interneuron
176 PC_4-3 Posterior Cortex Neuron Posterior Cortex Gad1Gad2 Cplx3-Egln3 Neuron.Gad1Gad2.Cplx3-Egln3 Cortical subplate interneuron
177 PC_4-4 Posterior Cortex Neuron Posterior Cortex Gad1Gad2-Slc17a8 Synpr-Sncg-Yjefn3 Neuron.Gad1Gad2-Slc17a8.Synpr-Sncg-Yjefn3 Neuron.Gad1Gad2-Slc17a8.Synpr-Sncg-Yjefn3
178 PC_4-5 Posterior Cortex Neuron Posterior Cortex Gad1Gad2 Synpr-Sncg Neuron.Gad1Gad2.Synpr-Sncg Neuron.Gad1Gad2.Synpr-Sncg
179 PC_4-6 Posterior Cortex Neuron Posterior Cortex Gad1Gad2 Synpr-Nnat Neuron.Gad1Gad2.Synpr-Nnat Neuron.Gad1Gad2.Synpr-Nnat
180 PC_4-7 Posterior Cortex Neuron Posterior Cortex Gad1Gad2 Synpr-Crispld2 Neuron.Gad1Gad2.Synpr-Crispld2 Neuron.Gad1Gad2.Synpr-Crispld2
181 PC_4-8 Posterior Cortex Neuron Posterior Cortex Gad1Gad2-Chat Synpr-Slc5a7 Neuron.Gad1Gad2-Chat.Synpr-Slc5a7 Neuron.Gad1Gad2-Chat.Synpr-Slc5a7
182 PC_4-9 Posterior Cortex Neuron Posterior Cortex Gad1Gad2 Synpr-Pcdh11x Neuron.Gad1Gad2.Synpr-Pcdh11x Neuron.Gad1Gad2.Synpr-Pcdh11x
183 PC_5-1 Posterior Cortex Neuron Posterior Cortex Gad1Gad2 Pvalb-Unc5b Neuron.Gad1Gad2.Pvalb-Unc5b Neuron.Gad1Gad2.Pvalb-Unc5b
184 PC_5-2 Posterior Cortex Neuron Posterior Cortex Gad1Gad2 Pvalb-Nefm Neuron.Gad1Gad2.Pvalb-Nefm Neuron.Gad1Gad2.Pvalb-Nefm
185 PC_5-3 Posterior Cortex Neuron Posterior Cortex Gad1Gad2 Pvalb-Cartpt Neuron.Gad1Gad2.Pvalb-Cartpt Neuron.Gad1Gad2.Pvalb-Cartpt
186 PC_5-4 Posterior Cortex Neuron Posterior Cortex Gad1Gad2-Th Nr4a2 Neuron.Gad1Gad2-Th.Nr4a2 Neuron.Gad1Gad2-Th.Nr4a2
187 PC_5-5 Posterior Cortex Neuron Posterior Cortex Gad1Gad2 Sst-Crh Neuron.Gad1Gad2.Sst-Crh Neuron.Gad1Gad2.Sst-Crh
188 PC_5-6 Posterior Cortex Neuron Posterior Cortex Gad1Gad2 Sst-Pdyn Neuron.Gad1Gad2.Sst-Pdyn Neuron.Gad1Gad2.Sst-Pdyn
189 PC_5-7 Posterior Cortex Neuron Posterior Cortex Gad1Gad2 Sst-Nr2f2 Neuron.Gad1Gad2.Sst-Nr2f2 Neuron.Gad1Gad2.Sst-Nr2f2
190 PC_6-1 Posterior Cortex Neuron Posterior Cortex Slc17a7Slc17a6 Tshz2-Shisa8 Neuron.Slc17a7-Slc17a6.Shisa8 Layer 5, medial posterior cortex (Retrosplenial cortex (RSG), subiculum)
191 PC_6-2 Posterior Cortex Neuron Posterior Cortex Slc17a7Slc17a6 Tshz2-Fos Neuron.Slc17a7-Slc17a6.Tshz2-Fos Layer 5, medial posterior cortex (Retrosplenial cortex (RSG), subiculum)
192 PC_6-3 Posterior Cortex Neuron Posterior Cortex Slc17a7Slc17a6 Tshz2-Rasd1 Neuron.Slc17a7-Slc17a6.Tshz2-Rasd1 Presubiculum, Col5a2+
193 PC_6-4 Posterior Cortex Neuron Posterior Cortex Slc17a7Slc17a6 Tshz2-Nnat Neuron.Slc17a7-Slc17a6.Tshz2-Nnat Presubiculum, Col5a2+
194 PC_6-5 Posterior Cortex Neuron Posterior Cortex Slc17a7Slc17a6 Tshz2-Cabp7 Neuron.Slc17a7-Slc17a6.Tshz2-Cabp7 Retrosplenial areas, subiculum, presubiculum, Cabp7+
195 PC_6-6 Posterior Cortex Neuron Posterior Cortex Slc17a7Slc17a6 Tshz2-Npnt Neuron.Slc17a7-Slc17a6.Tshz2-Npnt Retrosplenial areas, layer 5, Npnt+
196 PC_6-7 Posterior Cortex Neuron Posterior Cortex Slc17a7Slc17a6 Tshz2-Prlr Neuron.Slc17a7-Slc17a6.Tshz2-Prlr Entorhinal cortex?
197 PC_7-1 Posterior Cortex Neuron Posterior Cortex Slc17a7-Slc17a8 Fezf2-Slc17a8 Neuron.Slc17a7-Slc17a8.Fezf2-Slc17a8 Layer 5, Retrosplenial cortex (RSG) and Subiculum, Tshz2+
198 PC_7-2 Posterior Cortex Neuron Posterior Cortex Slc17a7-Slc17a6 Fezf2-Htr2c Neuron.Slc17a7-Slc17a6.Fezf2-Htr2c Layer 5, Retrosplenial cortex (RSG) and Subiculum, Tshz2+
199 PC_7-3 Posterior Cortex Neuron Posterior Cortex Slc17a7-Slc17a6 Fezf2-3110035E14Rik Neuron.Slc17a7-Slc17a6.Fezf2-3110035E14Rik Layer 5, Retrosplenial cortex (RSG) and Subiculum, Tshz2+
200 ENT_7-1 Entopeduncular nucleus & subthalamic nucleus Astrocyte Gja1 Myoc Astrocyte.Gja1.Myoc Astrocyte.Gja1.Myoc
201 ENT_7-2 Entopeduncular nucleus & subthalamic nucleus Astrocyte Gja1 Htra1 Astrocyte.Gja1.Htra1 Astrocyte.Gja1.Htra1
202 ENT_2-1 Entopeduncular nucleus & subthalamic nucleus Endothelial_Stalk Flt1 Car4 Endothelial_Stalk.Flt1.Car4 Endothelial_Stalk.Flt1.Car4
203 ENT_2-2 Entopeduncular nucleus & subthalamic nucleus Endothelial_Stalk Flt1 Vwf Endothelial_Stalk.Flt1.Vwf Endothelial_Stalk.Flt1.Vwf
204 ENT_2-3 Entopeduncular nucleus & subthalamic nucleus Endothelial_Stalk Flt1 Tgfb2 Endothelial_Stalk.Flt1.Tgfb2 Endothelial_Stalk.Flt1.Tgfb2
205 ENT_2-4 Entopeduncular nucleus & subthalamic nucleus Endothelial_Stalk Flt1 Gkn3 Endothelial_Stalk.Flt1.Gkn3 Endothelial_Stalk.Flt1.Gkn3
206 ENT_3-2 Entopeduncular nucleus & subthalamic nucleus Endothelial_Tip Dcn Dcn Endothelial_Tip.Dcn Endothelial_Tip.Dcn
207 ENT_3-1 Entopeduncular nucleus & subthalamic nucleus Mural Rgs5Acta2 Kcnj8 Mural.Rgs5Acta2.Kcnj8 Mural.Rgs5Acta2.Kcnj8
208 ENT_3-3 Entopeduncular nucleus & subthalamic nucleus Mural Rgs5Acta2 Pdgfa Mural.Rgs5Acta2.Pdgfa Mural.Rgs5Acta2.Pdgfa
209 ENT_3-4 Entopeduncular nucleus & subthalamic nucleus Mural Rgs5Acta2 Ccnd1 Mural.Rgs5Acta2.Ccnd1 Mural.Rgs5Acta2.Ccnd1
210 ENT_3-5 Entopeduncular nucleus & subthalamic nucleus Mural Rgs5Acta2 Cnn1 Mural.Rgs5Acta2.Cnn1 Mural.Rgs5Acta2.Cnn1
211 ENT_3-6 Entopeduncular nucleus & subthalamic nucleus Mural Rgs5Acta2 Junb Mural.Rgs5Acta2.Junb Mural, IEG+
212 ENT_1-1 Entopeduncular nucleus & subthalamic nucleus Oligodendrocyte Trf Serpinb1a Oligodendrocyte.Trf.Serpinb1a Oligodendrocyte.Trf.Serpinb1a
213 ENT_1-2 Entopeduncular nucleus & subthalamic nucleus Oligodendrocyte Trf Klk6 Oligodendrocyte.Trf.Klk6 Oligodendrocyte.Trf.Klk6
214 ENT_1-3 Entopeduncular nucleus & subthalamic nucleus Oligodendrocyte Trf Ndrg2 Oligodendrocyte.Trf.Ndrg2 Oligodendrocyte.Trf.Ndrg2
215 ENT_1-4 Entopeduncular nucleus & subthalamic nucleus Oligodendrocyte Trf Il33 Oligodendrocyte.Trf.Il33 Oligodendrocyte.Trf.Il33
216 ENT_1-5 Entopeduncular nucleus & subthalamic nucleus Oligodendrocyte Trf Ctps Oligodendrocyte.Trf.Ctps Oligodendrocyte.Trf.Ctps
217 ENT_8-1 Entopeduncular nucleus & subthalamic nucleus Oligodendrocyte Trf Cldn11 Oligodendrocyte.Trf.Cldn11 Oligodendrocyte.Trf.Cldn11
218 ENT_8-2 Entopeduncular nucleus & subthalamic nucleus Oligodendrocyte Trf Ndrg2 Oligodendrocyte.Trf.Ndrg2 MyelinProcess
219 ENT_5-1 Entopeduncular nucleus & subthalamic nucleus Polydendrocyte Tnr Bmp4 Polydendrocyte.Tnr.Bmp4 Polydendrocyte.Tnr.Bmp4
220 ENT_5-2 Entopeduncular nucleus & subthalamic nucleus Polydendrocyte Tnr Pdgfa Polydendrocyte.Tnr.Pdgfa Polydendrocyte.Tnr.Pdgfa
221 ENT_5-3 Entopeduncular nucleus & subthalamic nucleus Polydendrocyte Tnr Ctps Polydendrocyte.Tnr.Ctps Polydendrocyte.Tnr.Ctps
222 ENT_6-1 Entopeduncular nucleus & subthalamic nucleus Polydendrocyte Tnr Cspg5 Polydendrocyte.Tnr.Cspg5 NG2 cells
223 ENT_4-1 Entopeduncular nucleus & subthalamic nucleus Neuron Entopeduncular nucleus & subthalamic nucleus Slc17a7 Zbtb20 Neuron.Slc17a7.Zbtb20 Ventral Hippocampus
224 ENT_4-10 Entopeduncular nucleus & subthalamic nucleus Neuron Entopeduncular nucleus & subthalamic nucleus Gad1Gad2 Pmch Neuron.Gad1Gad2.Pmch Lateral hypothalamus (LH)
225 ENT_4-11 Entopeduncular nucleus & subthalamic nucleus Neuron Entopeduncular nucleus & subthalamic nucleus Gad1Gad2 Otx2 Neuron.Gad1Gad2.Otx2 ventral lateral geniculate nucleus, magnocellular part (VLGMC)?
226 ENT_4-12 Entopeduncular nucleus & subthalamic nucleus Neuron Entopeduncular nucleus & subthalamic nucleus Gad1Gad2-Chat Lhx8 Neuron.Gad1Gad2-Chat Nucleus basalis (NB) 
227 ENT_4-2 Entopeduncular nucleus & subthalamic nucleus Neuron Entopeduncular nucleus & subthalamic nucleus Gad1Gad2 Six3-Pvalb Neuron.Gad1Gad2.Six3-Pvalb Thalamic reticular nucleus, TRN+
228 ENT_4-3 Entopeduncular nucleus & subthalamic nucleus Neuron Entopeduncular nucleus & subthalamic nucleus Gad1Gad2-Slc17a6 Cbln1 Neuron.Gad1Gad2-Slc17a6.Cbln1 Entopeduncular Nucleus (Ent), GABA/Glu co-releasing
229 ENT_4-4 Entopeduncular nucleus & subthalamic nucleus Neuron Entopeduncular nucleus & subthalamic nucleus Gad1Gad2 Dlk1 Neuron.Gad1Gad2.Dlk1 Zona Incerta, ventral part (ZIV) and/or Lateral hypothalamus (LH)
230 ENT_4-5 Entopeduncular nucleus & subthalamic nucleus Neuron Entopeduncular nucleus & subthalamic nucleus Gad1Gad2 Tcf7l2 Neuron.Gad1Gad2.Tcf7l2 Entopeduncular Nucleus (Ent)
231 ENT_4-6 Entopeduncular nucleus & subthalamic nucleus Neuron Entopeduncular nucleus & subthalamic nucleus Slc17a6 Pitx2 Neuron.Slc17a6.Pitx2 Subthalamic Nucleus (STN), maybe ENT as well
232 ENT_4-7 Entopeduncular nucleus & subthalamic nucleus Neuron Entopeduncular nucleus & subthalamic nucleus Gad1Gad2 Pvalb_Gfra2 Neuron.Gad1Gad2.Pvalb-Gfra2 Zona Incerta, ventral part (ZIV)
233 ENT_4-8 Entopeduncular nucleus & subthalamic nucleus Neuron Entopeduncular nucleus & subthalamic nucleus Gad1Gad2 Pvalb_Ntng1 Neuron.Gad1Gad2.Pvalb-Ntng1 Entopeduncular Nucleus (Ent) or Zona Incerta, ventral part (ZIV). State signal?
234 ENT_4-9 Entopeduncular nucleus & subthalamic nucleus Neuron Entopeduncular nucleus & subthalamic nucleus Gad1Gad2 Pvalb-Spp1 Neuron.Gad1Gad2.Pvalb-Spp1 Entopeduncular Nucleus (Ent) or Zona Incerta, ventral part (ZIV). State signal?
235 GP_5-1 Globus pallidus externus & nucleus basalis Astrocyte Gja1 Gfap Astrocyte.Gja1.Gfap Astrocyte.Gja1.Gfap
236 GP_5-2 Globus pallidus externus & nucleus basalis Astrocyte Gja1 Crym Astrocyte.Gja1.Crym Astrocyte.Gja1.Crym
237 GP_7-1 Globus pallidus externus & nucleus basalis Endothelial_Stalk Flt1 Pi16 Endothelial_Stalk.Flt1.Apold1 Endothelial_Stalk.Flt1.Apold1
238 GP_7-2 Globus pallidus externus & nucleus basalis Endothelial_Stalk Flt1 Cdkn1c Endothelial_Stalk.Flt1.Cdkn1c Endothelial_Stalk.Flt1.Cdkn1c
239 GP_7-3 Globus pallidus externus & nucleus basalis Endothelial_Stalk Flt1 Gkn3 Endothelial_Stalk.Flt1.Mgp Endothelial_Stalk.Flt1.Mgp
240 GP_7-4 Globus pallidus externus & nucleus basalis Endothelial_Stalk Flt1 Vwf Endothelial_Stalk.Flt1.Lcn2 Endothelial_Stalk.Flt1.Lcn2
241 GP_7-5 Globus pallidus externus & nucleus basalis Endothelial_Stalk Flt1 Car4 Endothelial_Stalk.Flt1.Car4 Endothelial_Stalk.Flt1.Car4
242 GP_7-6 Globus pallidus externus & nucleus basalis Endothelial_Stalk Flt1 Angpt2 Endothelial_Stalk.Flt1.Angpt2 Endothelial_Stalk.Flt1.Angpt2
243 GP_9-1 Globus pallidus externus & nucleus basalis Endothelial_Tip Dcn Mgp Endothelial_Tip.Dcn.Mgp Endothelial_Tip.Dcn.Mgp
244 GP_9-2 Globus pallidus externus & nucleus basalis Endothelial_Tip Dcn Col15a1 Endothelial_Tip.Dcn.Col15a1 Endothelial_Tip.Dcn.Col15a1
245 GP_9-3 Globus pallidus externus & nucleus basalis Endothelial_Tip Dcn Ifitm1 Endothelial_Tip.Dcn.Ifitm1 Endothelial_Tip.Dcn.Ifitm1
246 GP_6-1 Globus pallidus externus & nucleus basalis Ependymal Ccdc153 Ccdc153 Ependymal.Ccdc153 Ependymal
247 GP_11-2 Globus pallidus externus & nucleus basalis Macrophage C1qb Mrc1 Macrophage.C1qb.Mrc1 Resident macrophage
248 GP_11-1 Globus pallidus externus & nucleus basalis Microglia C1qb Tmem119 Microglia.C1qb.Tmem119 Microglia.C1qb.Tmem119
249 GP_4-6 Globus pallidus externus & nucleus basalis Mitotic MkI67   Mitotic.MkI67 Mitotic.MkI67
250 GP_8-1 Globus pallidus externus & nucleus basalis Mural Rgs5Acta2 Acta2 Mural.Rgs5Acta2.Acta2 Mural.Rgs5Acta2.Acta2
251 GP_8-2 Globus pallidus externus & nucleus basalis Mural Rgs5Acta2 Kcnj8 Mural.Rgs5Acta2.Kcnj8 Mural.Rgs5Acta2.Kcnj8
252 GP_8-3 Globus pallidus externus & nucleus basalis Mural Rgs5Acta2 Lmcd1 Mural.Rgs5Acta2.Lmcd1 Mural.Rgs5Acta2.Lmcd1
253 GP_8-4 Globus pallidus externus & nucleus basalis Mural Rgs5Acta2 Rgs5 Mural.Rgs5Acta2.Rgs5 Mural.Rgs5Acta2.Rgs5
254 GP_8-5 Globus pallidus externus & nucleus basalis Mural Rgs5Acta2 Pappa2 Mural.Rgs5Acta2.Pappa2 Mural.Rgs5Acta2.Pappa2
255 GP_10-1 Globus pallidus externus & nucleus basalis Oligodendrocyte Trf Mbp Oligodendrocyte.Trf.Mbp Oligodendrocyte.Trf.Mbp
256 GP_10-2 Globus pallidus externus & nucleus basalis Oligodendrocyte Trf Klk6 Oligodendrocyte.Trf.Klk6 Oligodendrocyte.Trf.Klk6
257 GP_10-3 Globus pallidus externus & nucleus basalis Oligodendrocyte Trf Ttyh1 Oligodendrocyte.Trf.Ttyh1 Oligodendrocyte.Trf.Ttyh1
258 GP_10-4 Globus pallidus externus & nucleus basalis Oligodendrocyte Trf Ctps Oligodendrocyte.Trf.Ctps Oligodendrocyte.Trf.Ctps
259 GP_10-5 Globus pallidus externus & nucleus basalis Oligodendrocyte Trf Il33 Oligodendrocyte.Trf.Il33 Oligodendrocyte.Trf.Il33
260 GP_10-6 Globus pallidus externus & nucleus basalis Oligodendrocyte Trf Kif5b Oligodendrocyte.Trf.Kif5b Oligodendrocyte.Trf.Kif5b
261 GP_4-1 Globus pallidus externus & nucleus basalis Polydendrocyte Tnr Pdgfa-Pik3r3 Polydendrocyte.Tnr.Pdgfa-Pik3r3 Polydendrocyte.Tnr.Pdgfa-Pik3r3
262 GP_4-2 Globus pallidus externus & nucleus basalis Polydendrocyte Tnr Pdgfa-Tmem2 Polydendrocyte.Tnr.Pdgfa-Tmem2 Polydendrocyte.Tnr.Pdgfa-Tmem2
263 GP_4-3 Globus pallidus externus & nucleus basalis Polydendrocyte Tnr Opalin Polydendrocyte.Tnr.Opalin Polydendrocyte.Tnr.Opalin
264 GP_4-4 Globus pallidus externus & nucleus basalis Polydendrocyte Tnr Bmp4 Polydendrocyte.Tnr.Bmp4 Polydendrocyte.Tnr.Bmp4
265 GP_4-5 Globus pallidus externus & nucleus basalis Polydendrocyte Tnr Cspg5 Polydendrocyte.Tnr.Cspg5 Polydendrocyte.Tnr.Cspg5
266 GP_4-7 Globus pallidus externus & nucleus basalis Polydendrocyte Tnr Cyth3 Polydendrocyte.Tnr.Cyth3 Polydendrocyte.Tnr.Cyth3
267 GP_1-1 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Chat-Gad1Gad2-Slc17a8 Ngfr Neuron.Chat-Gad1Gad2-Slc17a8.Ngfr Globus Pallidus/Nucleus Basalis (GP/NB), cholinergic
268 GP_1-2 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Chat-Gad1Gad2-Slc17a8 Nefm Neuron.Chat-Gad1Gad2-Slc17a8.Nefm Globus Pallidus/Nucleus Basalis (GP/NB), cholinergic
269 GP_2-1 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2 Tac1 Neuron.Gad1Gad2.Tac1 Substantia Innominata (SI)
270 GP_2-10 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2 Cadm2 Neuron.Gad1Gad2.Cadm2 Cadm2+ state
271 GP_2-11 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Slc17a7 Neurod2.Rorb Neuron.Slc17a7.Neurod2-Rorb Nucleus of the lateral olfactory tract (LOT) 
272 GP_2-12 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Slc17a7 Neurod2.C1ql3 Neuron.Slc17a7.Neurod2-C1ql3 Nucleus of the lateral olfactory tract (LOT) 
273 GP_2-13 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2 Grem Neuron.Gad1Gad2.Grem Globus Pallidus Externus (GP), Lhx6-enriched
274 GP_2-14 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2 Pvalb Neuron.Gad1Gad2.Scn4b Globus Pallidus Externus (GP), “Prototypical”
275 GP_2-15 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2 Fibcd1 Neuron.Gad1Gad2.Fibcd1 ventral GP (vGP)
276 GP_2-16 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2 Trdn Neuron.Gad1Gad2.Trdn Ventral Globus Pallidus Externus (vGP) / Ventral Pallidum (VP) / magnocellular preoptic nucleus (MCPO)
277 GP_2-17 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2 Elfn1-Grik3 Neuron.Gad1Gad2.Elfn1-Grik3 Globus Pallidus Externus (GP)
278 GP_2-18 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2 Pappa Neuron.Gad1Gad2.Pappa ventral GP (vGP)
279 GP_2-19 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2 Cyp26b1 Neuron.Gad1Gad2.Cyp26b1 Globus Pallidus Externus (GP), “Arkypallidal”
280 GP_2-2 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Slc17a6 Cck Neuron.Slc17a6.Cck Substantia Innominata (SI)
281 GP_2-20 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2 Six3-Pvalb Neuron.Gad1Gad2.Six3-Pvalb Thalamic reticular nucleus (TRN)
282 GP_2-21 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2 Vip Neuron.Gad1Gad2.Vip ventral GP (vGP)
283 GP_2-22 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2 Cplx3 Neuron.Gad1Gad2.Lamp5-Cplx3 Substantia Innominata (SI)
284 GP_2-23 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2 Trh Neuron.Gad1Gad2.Trh Substantia Innominata (SI)
285 GP_2-24 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2 Igfbp4.Rgs4 Neuron.Gad1Gad2.Igfbp4.Rgs4 Striatum, interneuron
286 GP_2-25 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2 Igfbp4.Adora1 Neuron.Gad1Gad2.Igfbp4.Adora1 Striatum, interneuron
287 GP_2-3 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2 Tac2 Neuron.Gad1Gad2.Tac2 Substantia Innominata (SI), dorsal, bordering GP
288 GP_2-4 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2 Hpcal4 Neuron.Gad1Gad2.Hpcal4 Substantia Innominata (SI)
289 GP_2-5 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2 Sst Neuron.Gad1Gad2.Sst Striatum, interneuron
290 GP_2-6 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2 Satb1 Neuron.Gad1Gad2.Satb1 Substantia Innominata (SI)
291 GP_2-7 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2-Slc17a6 Cbln1 Neuron.Gad1Gad2-Slc17a6.Cbln1 Entopeduncular Nucleus (Ent), GABA/Glu co-releasing
292 GP_2-8 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Slc17a6 Tcf7l2 Neuron.Slc17a6.Tcf7l2 Substantia Innominata (SI)
293 GP_2-9 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Slc17a6 Rspo3 Neuron.Slc17a6.Rspo3 Substantia Innominata (SI)
294 GP_3-1 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2 Drd1-Nefm Neuron.Gad1Gad2.Drd1-Nefm Striatum, dSPNs, neurofilament state+
295 GP_3-10 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2 Vipr2 Neuron.Gad1Gad2.Vipr2 central amygdaloid nucleus, medial division, anterodorsal part (CeMAD)
296 GP_3-2 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2 Drd1-Pdyn Neuron.Gad1Gad2.Drd1-Pdyn Striatum, patch dSPNs
297 GP_3-3 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2 Adora2a Neuron.Gad1Gad2.Adora2a Striatum, iSPNs
298 GP_3-4 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2 Cadm2 Neuron.Gad1Gad2.Cadm2 Striatum, Cadm state SPNs
299 GP_3-5 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2 Drd1-Pde1c Neuron.Gad1Gad2.Drd1-Pde1c Striatum, dSPNs, Pde1c +
300 GP_3-6 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2 Adora2a-Pde1c Neuron.Gad1Gad2.Adora2a-Pde1c Striatum, iSPNs, Pde1c +
301 GP_3-7 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2 Sphkap-Tmem255a Neuron.Gad1Gad2.Sphkap-Tmem255a Basomedial amygdaloid nucleus (BMA)
302 GP_3-8 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2 Sphkap-Cpne4 Neuron.Gad1Gad2.Sphkap-Cpne4 Basomedial amygdaloid nucleus (BMA)
303 GP_3-9 Globus pallidus externus & nucleus basalis Neuron Globus pallidus externus & nucleus basalis Gad1Gad2-Th Adora2a-Th Neuron.Gad1Gad2-Th.Adora2a-Th Striatum, Th+ SPN
304 HC_7-1 Hippocampus Astrocyte Gja1 Nnat Astrocyte.Gja1.Nnat Astrocyte.Gja1.Nnat
305 HC_7-2 Hippocampus Astrocyte Gja1 Myoc Astrocyte.Gja1.Myoc Astrocyte.Gja1.Myoc
306 HC_7-3 Hippocampus Astrocyte Gja1 Fabp7 Astrocyte.Gja1.Fabp7 Astrocyte.Gja1.Fabp7
307 HC_12-1 Hippocampus Choroid_Plexus Ttr Ttr Choroid_Plexus.Ttr Choroid_Plexus.Ttr
308 HC_15-1 Hippocampus Endothelial_Stalk Flt1 Cdkn2b Endothelial_Stalk.Flt1.Cdkn2b Endothelial_Stalk.Flt1.Cdkn2b
309 HC_15-2 Hippocampus Endothelial_Stalk Flt1 Lcn2 Endothelial_Stalk.Flt1.Lcn2 Endothelial_Stalk.Flt1.Lcn2
310 HC_17-1 Hippocampus Endothelial_Tip Dcn Rbp4 Endothelial_Tip.Dcn.Rbp4 Endothelial_Tip.Dcn.Rbp4
311 HC_17-2 Hippocampus Endothelial_Tip Dcn Agt Endothelial_Tip.Dcn.Agt Endothelial_Tip.Dcn.Agt
312 HC_17-3 Hippocampus Endothelial_Tip Dcn Mgp Endothelial_Tip.Dcn.Mgp Endothelial_Tip.Dcn.Mgp
313 HC_17-4 Hippocampus Endothelial_Tip Dcn Il33 Endothelial_Tip.Dcn.Il33 Endothelial_Tip.Dcn.Il33
314 HC_11-1 Hippocampus Ependymal Ccdc153 NA Ependymal.Ccdc153 Ependymal.Ccdc153
315 HC_10-2 Hippocampus Macrophage C1qb Mrc1 Macrophage.C1qb.Mrc1 Resident macrophage
316 HC_10-1 Hippocampus Microglia C1qb Tmem119 Microglia.C1qb.Tmem119 Microglia.C1qb.Tmem119
317 HC_16-1 Hippocampus Mural Rgs5Acta2 Cnn1 Mural.Rgs5Acta2.Cnn1 Mural.Rgs5Acta2.Cnn1
318 HC_16-2 Hippocampus Mural Rgs5Acta2 Ccnd1 Mural.Rgs5Acta2.Ccnd1 Mural.Rgs5Acta2.Ccnd1
319 HC_16-3 Hippocampus Mural Rgs5Acta2 Kcnj8 Mural.Rgs5Acta2.Kcnj8 Mural.Rgs5Acta2.Kcnj8
320 HC_16-4 Hippocampus Mural Rgs5Acta2 Col3a1 Mural.Rgs5Acta2.Col3a1 Mural.Rgs5Acta2.Col3a1
321 HC_13-1 Hippocampus Neurogenesis Sox4 Efhd2 Neurogenesis.Sox4.Efhd2 Neurogenesis (SGZ)
322 HC_13-2 Hippocampus Neurogenesis Sox4 Hist1h2al Neurogenesis.Sox4.Hist1h2al Neurogenesis (SGZ)
323 HC_13-3 Hippocampus Neurogenesis Sox4 Cdc20 Neurogenesis.Sox4.Cdc20 Neurogenesis (SGZ)
324 HC_13-4 Hippocampus Neurogenesis Sox4 Gad2 Neurogenesis.Sox4.Gad2 Neurogenesis (SGZ)
325 HC_13-5 Hippocampus Neurogenesis Sox4 Gabra5 Neurogenesis.Sox4.Gabra5 Neurogenesis (SGZ)
326 HC_13-6 Hippocampus Neurogenesis Sox4 Ppp2r2b Neurogenesis.Sox4.Ppp2r2b Neurogenesis (SGZ)
327 HC_8-1 Hippocampus Oligodendrocyte Trf Plin3 Oligodendrocyte.Trf.Plin3 Oligodendrocyte.Trf.Plin3
328 HC_8-2 Hippocampus Oligodendrocyte Trf Ndrg2 Oligodendrocyte.Trf.Ndrg2 MyelinProcesses
329 HC_8-3 Hippocampus Oligodendrocyte Trf Il33 Oligodendrocyte.Trf.Il33 Oligodendrocyte.Trf.Il33
330 HC_8-4 Hippocampus Oligodendrocyte Trf Man1a Oligodendrocyte.Trf.Man1a Oligodendrocyte.Trf.Man1a
331 HC_8-5 Hippocampus Oligodendrocyte Trf Ctps Oligodendrocyte.Trf.Ctps Oligodendrocyte.Trf.Ctps
332 HC_9-1 Hippocampus Polydendrocyte Tnr Pdgfa Polydendrocyte.Tnr.Pdgfa Polydendrocyte.Tnr.Pdgfa
333 HC_9-2 Hippocampus Polydendrocyte Tnr Bmp4 Polydendrocyte.Tnr.Bmp4 Polydendrocyte.Tnr.Bmp4
334 HC_9-3 Hippocampus Polydendrocyte Tnr Cspg5 Polydendrocyte.Tnr.Cspg5 Polydendrocyte.Tnr.Cspg5
335 HC_9-4 Hippocampus Polydendrocyte Tnr Ptprz1 Polydendrocyte.Tnr.Ptprz1 Polydendrocyte.Tnr.Ptprz1
336 HC_1-1 Hippocampus Neuron Hippocampus Gad1Gad2_Pvalb C1ql1 Neuron.Gad1Gad2_Pvalb.C1ql1 Interneuron, Chandelier
337 HC_1-10 Hippocampus Neuron Hippocampus Gad1Gad2_Sst Pcdh11x Neuron.Gad1Gad2_Sst.Pcdh11x Interneuron, OLM4 (Dentate enriched?)
338 HC_1-11 Hippocampus Neuron Hippocampus Gad1Gad2_Cplx3 Rxfp1 Gad1Gad2_Cplx3.Rxfp1 Interneuron, CA1 lacunosum moleculare1?
339 HC_1-12 Hippocampus Neuron Hippocampus Gad1Gad2_Cplx3 Tox Gad1Gad2_Cplx3.Tox Interneuron, lacunosum oriens1?
340 HC_1-13 Hippocampus Neuron Hippocampus Gad1Gad2_Id2 Tac1 Gad1Gad2_Id2.Tac1 Interneuron, Neurogliaform1
341 HC_1-14 Hippocampus Neuron Hippocampus Gad1Gad2_Id2 Bcl11b Gad1Gad2_Id2.Bcl11b Interneuron, Neurogliaform2
342 HC_1-15 Hippocampus Neuron Hippocampus Gad1Gad2_Id2 Prlr Gad1Gad2_Id2.Prlr Interneuron, Neurogliaform3
343 HC_1-16 Hippocampus Neuron Hippocampus Gad1Gad2_Htr3a Nnat Gad1Gad2_Htr3a.Nnat Interneuron,  (candidate CGE-derived 1)
344 HC_1-17 Hippocampus Neuron Hippocampus Gad1Gad2Chat_Htr3a Chat Gad1Gad2Chat_Htr3a.Chat Interneuron, Cholinergic (candidate  CGE-derived 2)
345 HC_1-18 Hippocampus Neuron Hippocampus Gad1Gad2_Htr3a Phlda1 Gad1Gad2_Htr3a.Phlda1 Interneuron,  (candidate CGE-derived 3)
346 HC_1-19 Hippocampus Neuron Hippocampus Gad1Gad2Slc17a8_Htr3a Efna5 Gad1Gad2_Htr3a.Efba5 Interneuron,  (candidate CGE-derived 4)
347 HC_1-2 Hippocampus Neuron Hippocampus Gad1Gad2_Id2 Sfrp2 Neuron.Gad1Gad2_Id2.Sfrp2 Interneuron, Neurogliaform1
348 HC_1-20 Hippocampus Neuron Hippocampus Gad1Gad2_Htr3a Cpne5 Gad1Gad2_Htr3a.Cpne5 Interneuron,  (candidate CGE-derived 5)
349 HC_1-21 Hippocampus Neuron Hippocampus Gad1Gad2_Htr3a Ecel1 Gad1Gad2_Htr3a.Ecel1 Interneuron,  (candidate CGE-derived 6)
350 HC_1-22 Hippocampus Neuron Hippocampus Gad1Gad2Slc17a8_Htr3a Ibsp Gad1Gad2_Htr3a.Ibsp Interneuron,  (candidate CGE-derived 7)
351 HC_1-23 Hippocampus Neuron Hippocampus Gad1Gad2_Htr3a Krt73 Gad1Gad2_Htr3a.Krt73 Interneuron,  (candidate CGE-derived 8)
352 HC_1-24 Hippocampus Neuron Hippocampus Gad1Gad2Slc17a8_Htr3a Kctd12 Gad1Gad2Slc17a8_Htr3a.Ktcd12 Interneuron,  GABA/Glutamate co-releasing? (candidate CGE-derived 9)
353 HC_1-25 Hippocampus Neuron Hippocampus Gad1Gad2_Htr3a Chrm2 Gad1Gad2_Htr3a.Chrm2 Interneuron,  (candidate CGE-derived 10)
354 HC_1-26 Hippocampus Neuron Hippocampus Gad1Gad2_Htr3a Htr1b Gad1Gad2_Htr3a.Htr1b Interneuron,  (candidate CGE-derived 11)
355 HC_1-27 Hippocampus Neuron Hippocampus Gad1Gad2_Htr3a Sema3c Gad1Gad2_Htr3a.Sema3c Interneuron,  (candidate CGE-derived 12)
356 HC_1-3 Hippocampus Neuron Hippocampus Gad1Gad2_Sst Atp2b4 Neuron.Gad1Gad2_Sst.Atp2b4 Interneuron, Olm
357 HC_1-4 Hippocampus Neuron Hippocampus Gad1Gad2Slc17a8_Sst Slc17a8 Neuron.Gad1Gad2Slc17a8_Sst.Ncam2 Interneuron,  GABA/Glutamate co-releasing?
358 HC_1-5 Hippocampus Neuron Hippocampus Gad1Gad2_Sst Spon1 Neuron.Gad1Gad2_Sst.Spon1 Interneuron, OLM1
359 HC_1-6 Hippocampus Neuron Hippocampus Gad1Gad2_Pvalb Tac1 Neuron.Gad1Gad2_Pvalb.Tac1 Interneuron, Basket 1
360 HC_1-7 Hippocampus Neuron Hippocampus Gad1Gad2_Pvalb Gfra1 Neuron.Gad1Gad2_Pvalb.Gfra1 Interneuron, Basket 1
361 HC_1-8 Hippocampus Neuron Hippocampus Gad1Gad2_Sst Rbp4 Neuron.Gad1Gad2_Sst.Rbp4 Interneuron, OLM2 (CA1 enriched?)
362 HC_1-9 Hippocampus Neuron Hippocampus Gad1Gad2_Sst Grm1 Neuron.Gad1Gad2_Sst.Grm1 Interneuron, OLM3 (CA1 enriched?)
363 HC_14-1 Hippocampus Neuron Hippocampus Slc17a6 Lhx1 Neuron.Slc17a6.Lhx1 Cajal-retzius
364 HC_2-1 Hippocampus Neuron Hippocampus Slc17a7 Cbln4 Neuron.Slc17a7.Cbln4 Neuron.Slc17a7.Cbln4
365 HC_2-2 Hippocampus Neuron Hippocampus Slc17a6 Htr1a Neuron.Slc17a6.Htr1a Neuron.Slc17a6.Htr1a
366 HC_2-3 Hippocampus Neuron Hippocampus Slc17a6 Nts Neuron.Slc17a6.Nts Neuron.Slc17a6.Nts
367 HC_2-4 Hippocampus Neuron Hippocampus Slc17a6 Nnat Neuron.Slc17a6.Nnat Neuron.Slc17a6.Nnat
368 HC_2-5 Hippocampus Neuron Hippocampus Slc17a6 Nell1 Neuron.Slc17a6.Nell1 Neuron.Slc17a6.Nell1
369 HC_2-6 Hippocampus Neuron Hippocampus Slc17a6 Nefm Neuron.Slc17a6.Nefm Neuron.Slc17a6.Nefm
370 HC_2-7 Hippocampus Neuron Hippocampus Slc17a6 Grp Neuron.Slc17a6.Grp Neuron.Slc17a6.Grp
371 HC_3-1 Hippocampus Neuron Hippocampus Slc17a7-Slc17a6 Nxph3-Nts Neuron.Slc17a7-Slc17a6.Nxph3-Nts Subiculum
372 HC_3-10 Hippocampus Neuron Hippocampus Slc17a7 Nxph3-Sema3c Neuron.Slc17a7.Nxph3-Sema3c Entorhinal cortex
373 HC_3-11 Hippocampus Neuron Hippocampus Slc17a7 Nxph3-Ajap1 Neuron.Slc17a7.Nxph3-Ajap1 Entorhinal cortex
374 HC_3-2 Hippocampus Neuron Hippocampus Slc17a7-Slc17a6 Nxph3-Cbln2-Htr2c Neuron.Slc17a7-Slc17a6.Nxph3-Cbln2-Htr2c Deep layer subiculum
375 HC_3-3 Hippocampus Neuron Hippocampus Slc17a7-Slc17a6 Nxph3-Cbln2-Kcnh8 Neuron.Slc17a7-Slc17a6.Nxph3-Cbln2-Kcnh8 Deep layer subiculum
376 HC_3-4 Hippocampus Neuron Hippocampus Slc17a7 Nxph3-Hpcal1-Tpbg Neuron.Slc17a7.Nxph3-Hpcal1-Tpbg Entorhinal cortex
377 HC_3-5 Hippocampus Neuron Hippocampus Slc17a7 Nxph3-Hpcal1-Fos Neuron.Slc17a7.Nxph3-Hpcal1-Fos Entorhinal cortex (IEG)
378 HC_3-6 Hippocampus Neuron Hippocampus Slc17a7 Nxph3-Hpcal-Igfbp4 Neuron.Slc17a7.Nxph3-Hpcal-Igfbp4 Entorhinal cortex
379 HC_3-7 Hippocampus Neuron Hippocampus Slc17a7 Nxph3-Hpcal-Krt12 Neuron.Slc17a7.Nxph3-Hpcal-Krt12 Entorhinal cortex
380 HC_3-8 Hippocampus Neuron Hippocampus Slc17a7 Nxph3-Cplx3-Hs6st2 Neuron.Slc17a7.Nxph3-Cplx3-Hs6st2 Entorhinal cortex
381 HC_3-9 Hippocampus Neuron Hippocampus Slc17a7 Nxph3-Cplx3-Pappa2 Neuron.Slc17a7.Nxph3-Cplx3-Pappa2 Entorhinal cortex
382 HC_4-1 Hippocampus Neuron Hippocampus Slc17a7 C1ql2-Cck Neuron.Slc17a7.C1ql2-Cck Dentate Principal cells
383 HC_4-2 Hippocampus Neuron Hippocampus Slc17a7 C1ql2-Penk Neuron.Slc17a7.C1ql2-Penk Dentate Principal cells
384 HC_5-1 Hippocampus Neuron Hippocampus Slc17a7 Fibcd1-Lypd1 Neuron.Slc17a7.Fibcd1-Lypd1 CA1 Principal cells (Anterior)
385 HC_5-10 Hippocampus Neuron Hippocampus Slc17a7 Cbln1-Reln Neuron.Slc17a7.Reln Medial entorrhinal cortexm, Reln+/Cbln1+
386 HC_5-11 Hippocampus Neuron Hippocampus Slc17a7 Cbln1-Gpr88 Neuron.Slc17a7.Cbln1-Gpr88 Medial entorrhinal cortex
387 HC_5-12 Hippocampus Neuron Hippocampus Slc17a7 Cbln1-Trps1 Neuron.Slc17a7.Cbln1-Trps1 Medial entorrhinal cortex, Cbln1+/Trps1+
388 HC_5-13 Hippocampus Neuron Hippocampus Slc17a7 Ptgfr Neuron.Slc17a7.Ptgfr Postsubiculum
389 HC_5-14 Hippocampus Neuron Hippocampus Slc17a7 Fezf2 Neuron.Slc17a7.Fezf2-Efna5 Subiculum
390 HC_5-15 Hippocampus Neuron Hippocampus Slc17a7 Fezf2-Rxfp1 Neuron.Slc17a7.Fezf2-Rxfp1 Subiculum
391 HC_5-2 Hippocampus Neuron Hippocampus Slc17a7 Fibcd1-Nrip3 Neuron.Slc17a7.Fibcd1-Nrip3 CA1 Principal cells
392 HC_5-3 Hippocampus Neuron Hippocampus Slc17a7 Fibcd1-Nptx2 Neuron.Slc17a7.Fibcd1-Nptx2 CA1 Principal cells
393 HC_5-4 Hippocampus Neuron Hippocampus Slc17a7 Fibcd1-Kitl Neuron.Slc17a7.Fibcd1-Kitl CA1 Principal cells
394 HC_5-5 Hippocampus Neuron Hippocampus Slc17a7 Fibcd1-Grm5 Neuron.Slc17a7.Fibcd1-Grm5 CA1 Principal cells
395 HC_5-6 Hippocampus Neuron Hippocampus Slc17a7 Dcn-Pou3f1 Neuron.Slc17a7.Dcn-Pou3f1 Anterior Subiculum, proximal to CA1
396 HC_5-7 Hippocampus Neuron Hippocampus Slc17a7 Fibcd1-Inhba Neuron.Slc17a7.FIbcd1-Inhba CA1 Principal cells
397 HC_5-8 Hippocampus Neuron Hippocampus Slc17a7 Fibcd1-Fos Neuron.Slc17a7.Fibcd1-Fos CA1 Principal cells
398 HC_5-9 Hippocampus Neuron Hippocampus Slc17a7 Dcn-Camk2d Neuron.Slc17a7.Dcn-Camk2d CA1 Principal cells
399 HC_6-1 Hippocampus Neuron Hippocampus Slc17a7 Pvrl3-Nos1 Neuron.Slc17a7.Pvrl3-Nos1 CA3 Principal cells
400 HC_6-2 Hippocampus Neuron Hippocampus Slc17a7 Pvrl3-Grm5 Neuron.Slc17a7.Pvrl3-Grm5 CA3 Principal cells
401 HC_6-3 Hippocampus Neuron Hippocampus Slc17a7 Pvrl3-St18 Neuron.Slc17a7.Pvrl3-St18 Lateral CA3 Principal cells
402 HC_6-4 Hippocampus Neuron Hippocampus Slc17a7 Rgs14 Neuron.Slc17a7.Rgs14 CA2 Principal cells
403 HC_6-5 Hippocampus Neuron Hippocampus Slc17a7 Calb2-Vgll3 Neuron.Slc17a7.Calb2-Vgll3 Dentate hilum?
404 HC_6-6 Hippocampus Neuron Hippocampus Slc17a7 Calb2-Adcyap1 Neuron.Slc17a7.Calb2-Adcyap1 Dentate hilum?
405 HC_6-7 Hippocampus Neuron Hippocampus Slc17a7 Pvrl3-Inhba Neuron.Slc17a7.Pvrl3-Inhba CA3 Principal cells
406 HC_6-8 Hippocampus Neuron Hippocampus Slc17a7 Pvrl3-Fos Neuron.Slc17a7.Pvrl3-Fos CA3 Principal cells
407 STR_4-1 Striatum Astrocyte Gja1 Htra1 Astrocyte.Gja1.Htra1 Astrocyte.Gja1.Htra1
408 STR_4-2 Striatum Astrocyte Gja1 Sparc-Car2 Astrocyte.Gja1.Sparc-Car2 Astrocyte.Gja1.Sparc-Car2
409 STR_4-3 Striatum Astrocyte Gja1 Notum Astrocyte.Gja1.Notum Astrocyte.Gja1.Notum
410 STR_7-1 Striatum Endothelial_Stalk Flt1 Car4 Endothelial_Stalk.Flt1.Car4 Endothelial_Stalk.Flt1.Car4
411 STR_7-2 Striatum Endothelial_Stalk Flt1 Gkn3 Endothelial_Stalk.Flt1.Gkn3 Endothelial_Stalk.Flt1.Gkn3
412 STR_9-1 Striatum Endothelial_Tip Dcn Dcn Endothelial_Tip.Dcn Endothelial_Tip.Dcn
413 STR_1-1 Striatum Ependymal Ccdc153 Ccdc153 Ependyma_Ccdc153.Ccdc153 Ependyma_Ccdc153.Ccdc153
414 STR_6-1 Striatum Macrophage C1qb Mrc1 Macrophage.C1qb.Mrc1 Resident macrophage
415 STR_6-2 Striatum Microglia C1qb Tmem119 Microglia.C1qb.Tmem119 Microglia.C1qb.Tmem119
416 STR_8-1 Striatum Mural Rgs5Acta2 Olfr558 Mural.Rgs5Acta2.Olfr558 Mural.Rgs5Acta2.Olfr558
417 STR_8-2 Striatum Mural Rgs5Acta2 Cnn1 Mural.Rgs5Acta2.Cnn1 Mural.Rgs5Acta2.Cnn1
418 STR_8-3 Striatum Mural Rgs5Acta2 Ccnd1 Mural.Rgs5Acta2.Ccnd1 Mural.Rgs5Acta2.Ccnd1
419 STR_8-4 Striatum Mural Rgs5Acta2 Kcnj8 Mural.Rgs5Acta2.Kcnj8 Mural.Rgs5Acta2.Kcnj8
420 STR_8-5 Striatum Mural Rgs5Acta2 Col3a1 Mural.Rgs5Acta2.Col3a1 Mural.Rgs5Acta2.Col3a1
421 STR_2-1 Striatum Neurogenesis Sox4 Ung Neurogenesis.Sox4.Ung RostralÊmigratory streamÊ(RMS)
422 STR_2-2 Striatum Neurogenesis Sox4 Stmn2 Neurogenesis.Sox4.Stmn2 RostralÊmigratory streamÊ(RMS)
423 STR_2-3 Striatum Neurogenesis Sox4 Tuba1c Neurogenesis.Sox4.Tuba1c RostralÊmigratory streamÊ(RMS)
424 STR_2-4 Striatum Neurogenesis Sox4 Stmn2-Csrp2 Neurogenesis.Sox4.Stmn2-Csrp2 RostralÊmigratory streamÊ(RMS)
425 STR_2-5 Striatum Neurogenesis Sox4 Hist1h2al Neurogenesis.Sox4.Hist1h2al RostralÊmigratory streamÊ(RMS)
426 STR_2-6 Striatum Neurogenesis Sox4 Notum Neurogenesis.Sox4.Notum RostralÊmigratory streamÊ(RMS)
427 STR_3-1 Striatum Oligodendrocyte Trf Klk6 Oligodendrocyte.Trf.Klk6 Oligodendrocyte.Trf.Klk6
428 STR_3-2 Striatum Oligodendrocyte Trf Il33 Oligodendrocyte.Trf.Il33 Oligodendrocyte.Trf.Il33
429 STR_3-3 Striatum Oligodendrocyte Trf Ctps Oligodendrocyte.Trf.Ctps Oligodendrocyte.Trf.Ctps
430 STR_5-1 Striatum Polydendrocyte Tnr Cspg5 Polydendrocye.Tnr.Cspg5 Polydendrocye.Tnr.Cspg5
431 STR_5-2 Striatum Polydendrocyte Tnr Bmp4 Polydendrocye.Tnr.Bmp4 Polydendrocye.Tnr.Bmp4
432 STR_5-3 Striatum Polydendrocyte Tnr Pdgfa Polydendrocye.Tnr.Pdgfa Polydendrocye.Tnr.Pdgfa
433 STR_5-4 Striatum Polydendrocyte Tnr Ctps Polydendrocye.Tnr.Ctps Polydendrocye.Tnr.Ctps
434 STR_10-1 Striatum Neuron Striatum Gad1Gad2 Drd1-Fos Neuron.Gad1Gad2.Drd1-Fos dSPN, IEG+
435 STR_10-2 Striatum Neuron Striatum Gad1Gad2 Drd1-Lypd1 Neuron.Gad1Gad2.Drd1-Lypd1 dSPN, patch
436 STR_10-3 Striatum Neuron Striatum Gad1Gad2 Drd1-Pde1a Neuron.Gad1Gad2.Drd1-Pde1a dSPN
437 STR_10-4 Striatum Neuron Striatum Gad1Gad2 Drd1-Nefm Neuron.Gad1Gad2.Drd1-Nefm dSPN
438 STR_10-5 Striatum Neuron Striatum Gad1Gad2 Drd1-Cxcl14 Neuron.Gad1Gad2.Drd1-Cxcl14 dSPN, lateral striatum
439 STR_11-1 Striatum Neuron Striatum Gad1Gad2 Adora2a-Nefm Neuron.Gad1Gad2.Adora2a-Nefm iSPN
440 STR_11-2 Striatum Neuron Striatum Gad1Gad2 Adora2a-Nnat Neuron.Gad1Gad2.Adora2a-Nnat iSPN
441 STR_11-3 Striatum Neuron Striatum Gad1Gad2 Adora2a-Fos Neuron.Gad1Gad2.Adora2a-Fos iSPN, IEG+
442 STR_12-1 Striatum Neuron Striatum Gad1Gad2-Chat-Slc17a8 Chat Neuron.Gad1Gad2-Chat-Slc17a8.Chat cholinergic interneuron
443 STR_13-1 Striatum Neuron Striatum Gad1Gad2 Drd1-Tpbg Neuron.Gad1Gad2.Drd1-Tpbg eccentric SPN, dSPN-like markers
444 STR_13-10 Striatum Neuron Striatum Gad1Gad2 Drd1-Nfib Neuron.Gad1Gad2.Drd1-Nfib Amygdala
445 STR_13-11 Striatum Neuron Striatum Gad1Gad2 Sgol2a Neuron.Gad1Gad2.Sgol2a Very small cluster
446 STR_13-2 Striatum Neuron Striatum Gad1Gad2 Drd1-Otof Neuron.Gad1Gad2.Drd1-Otof-Sorcs1 eccentric SPN, dSPN-like markers
447 STR_13-3 Striatum Neuron Striatum Gad1Gad2 Drd1-Otof Neuron.Gad1Gad2.Drd1-Otof-Lmo2 eccentric SPN, dSPN-like markers
448 STR_13-4 Striatum Neuron Striatum Gad1Gad2 Adora2a-Otof Neuron.Gad1Gad2.Adora2a-Otof eccentric SPN, iSPN-like markers
449 STR_13-5 Striatum Neuron Striatum Gad1Gad2 Adora2a-Th Neuron.Gad1Gad2.Adora2a-Th eccentric SPN, iSPN-like markers, Th+
450 STR_13-6 Striatum Neuron Striatum Slc17a6 Oprk1 Neuron.Slc17a6.Oprk1 Claustrum cortex
451 STR_13-7 Striatum Neuron Striatum Slc17a7 Cplx3 Neuron.Slc17a7.Cplx3 Cortical subplate
452 STR_13-8 Striatum Neuron Striatum Slc17a7 Dkk3 Neuron.Slc17a7.Dkk3 Deep layer cortex
453 STR_13-9 Striatum Neuron Striatum Gad1Gad2 Resp18 Neuron.Gad1Gad2.Resp18 Bed nucleus of the stria terminalis (BNST)
454 STR_14-1 Striatum Neuron Striatum Gad1Gad2 Pvalb-Megf11 Neuron.Gad1Gad2_Pvalb.Pvalb-Megf11 Fast-spiking interneuron, Pvalb+
455 STR_14-2 Striatum Neuron Striatum Gad1Gad2 Pnoc Neuron.Gad1Gad2.Pnoc Fast-spiking interneuron, Pvalb+/Pnoc+
456 STR_14-3 Striatum Neuron Striatum Gad1Gad2 Pvalb-Rgs12 Neuron.Gad1Gad2.Pvalb-Rgs12 Fast-spiking interneuron, Pvalb+/Rgs12+
457 STR_14-4 Striatum Neuron Striatum Gad1Gad2-Th Trh Neuron.Gad1Gad2-Th.Trh Th+ interneuron
458 STR_15-1 Striatum Neuron Striatum Gad1Gad2 Chodl Neuron.Gad1Gad2.Chodl Low-threshold spiking interneuron, Npy+/Sst+
459 SN_7-1 Substantia nigra & Ventral tegmental area Astrocyte Gja1 Myoc Astrocyte.Gja1.Myoc Astrocyte.Gja1.Myoc
460 SN_7-2 Substantia nigra & Ventral tegmental area Astrocyte Gja1 Cst3 Astrocyte.Gja1.Cst3 Astrocyte.Gja1.Cst3
461 SN_7-3 Substantia nigra & Ventral tegmental area Astrocyte Gja1 Igfbp2 Astrocyte.Gja1.Igfbp2 Astrocyte.Gja1.Igfbp2
462 SN_12-1 Substantia nigra & Ventral tegmental area Endothelial_Stalk Flt1 Cdkn1c Endothelial_Stalk.Flt1.Cdkn1c Endothelial_Stalk.Flt1.Cdkn1c
463 SN_12-2 Substantia nigra & Ventral tegmental area Endothelial_Stalk Flt1 Gkn3 Endothelial_Stalk.Flt1.Gkn3 Endothelial_Stalk.Flt1.Gkn3
464 SN_12-3 Substantia nigra & Ventral tegmental area Endothelial_Stalk Flt1 Car4 Endothelial_Stalk.Flt1.Car4 Endothelial_Stalk.Flt1.Car4
465 SN_12-4 Substantia nigra & Ventral tegmental area Endothelial_Stalk Flt1 Vwf Endothelial_Stalk.Flt1.Vwf Endothelial_Stalk.Flt1.Vwf
466 SN_14-1 Substantia nigra & Ventral tegmental area Endothelial_Tip Dcn Mgp Endothelial_Tip.Dcn.Mgp Endothelial_Tip.Dcn.Mgp
467 SN_14-2 Substantia nigra & Ventral tegmental area Endothelial_Tip Dcn Ifitm1 Endothelial_Tip.Dcn.Ifitm1 Endothelial_Tip.Dcn.Ifitm1
468 SN_14-3 Substantia nigra & Ventral tegmental area Endothelial_Tip Dcn Alcam Endothelial_Tip.Dcn.Alcam Endothelial_Tip.Dcn.Alcam
469 SN_8-1 Substantia nigra & Ventral tegmental area Ependymal Ccdc153 Ccdc153 Ependyma.Ccdc153 Ependyma.Ccdc153
470 SN_9-1 Substantia nigra & Ventral tegmental area Macrophage C1qb Mrc1 Macrophage.C1qb.Mrc1 Resident macrophage
471 SN_9-2 Substantia nigra & Ventral tegmental area Microglia C1qb Tmem119 Microglia.C1qb.Tmem119 Microglia.C1qb.Tmem119
472 SN_13-1 Substantia nigra & Ventral tegmental area Mural Rgs5Acta2 Rgs5 Mural.Rgs5Acta2.Rgs5 Mural.Rgs5Acta2.Rgs5
473 SN_13-2 Substantia nigra & Ventral tegmental area Mural Rgs5Acta2 Kcnj8 Mural.Rgs5Acta2.Kcnj8 Mural.Rgs5Acta2.Kcnj8
474 SN_13-3 Substantia nigra & Ventral tegmental area Mural Rgs5Acta2 Cd9 Mural.Rgs5Acta2.Cd9 Mural.Rgs5Acta2.Cd9
475 SN_13-4 Substantia nigra & Ventral tegmental area Mural Rgs5Acta2 Cbr2 Mural.Rgs5Acta2.Cbr2 Mural.Rgs5Acta2.Cbr2
476 SN_13-5 Substantia nigra & Ventral tegmental area Mural Rgs5Acta2 Fos Mural.Rgs5Acta2.Fos Mural.Rgs5Acta2.Fos
477 SN_10-1 Substantia nigra & Ventral tegmental area Oligodendrocyte Tfr Slco3a1 Oligodendrocyte.Tfr.Slco3a1 Oligodendrocyte.Tfr.Slco3a1
478 SN_10-2 Substantia nigra & Ventral tegmental area Oligodendrocyte Tfr Plin3 Oligodendrocyte.Tfr.Plin3 Oligodendrocyte.Tfr.Plin3
479 SN_10-3 Substantia nigra & Ventral tegmental area Oligodendrocyte Tfr Ndrg2 Oligodendrocyte.Tfr.Ndrg2 Oligodendrocyte.Tfr.Ndrg2
480 SN_10-4 Substantia nigra & Ventral tegmental area Oligodendrocyte Tfr Il33 Oligodendrocyte.Tfr.Il33 Oligodendrocyte.Tfr.Il33
481 SN_10-5 Substantia nigra & Ventral tegmental area Oligodendrocyte Tfr Ctps Oligodendrocyte.Tfr.Ctps Oligodendrocyte.Tfr.Ctps
482 SN_11-1 Substantia nigra & Ventral tegmental area Oligodendrocyte Tnr Rps24 Oligodendrocyte.Tnr.Rps24 Oligodendrocyte.Tnr.Rps24
483 SN_5-1 Substantia nigra & Ventral tegmental area Polydendrocyte Tnr Bmp4 Polydendrocyte.Tnr.Bmp4 Polydendrocyte.Tnr.Bmp4
484 SN_5-2 Substantia nigra & Ventral tegmental area Polydendrocyte Tnr Tmem2 Polydendrocyte.Tnr.Tmem2 Polydendrocyte.Tnr.Tmem2
485 SN_5-3 Substantia nigra & Ventral tegmental area Polydendrocyte Tnr Opalin Polydendrocyte.Tnr.Opalin Polydendrocyte.Tnr.Opalin
486 SN_6-1 Substantia nigra & Ventral tegmental area Polydendrocyte Tnr Cspg5 Polydendrocyte.Tnr.Cspg5 Polydendrocyte.Tnr.Cspg5
487 SN_6-2 Substantia nigra & Ventral tegmental area Polydendrocyte Tnr Cspg5-Dad1 Polydendrocyte.Tnr.Cspg5-Dad1 Polydendrocyte.Tnr.Cspg5-Dad1
488 SN_1-1 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Slc17a7 C1ql3 Neuron.Slc17a7.C1ql3 Hippocampus Excitatory Neuron
489 SN_2-1 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Slc17a6 NA Neuron.Slc17a6 Thalamus, glutamatergic
490 SN_3-1 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Gad1Gad2 Nfib-Satb1 Neuron.Gad1Gad2.Nfib-Satb1 Supramammillary Nucleus (SuM)
491 SN_3-10 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Slc17a6 Cacna2d1 Neuron.Slc17a6.Cacna2d1 generic SN/VTA glutamatergic neuron
492 SN_3-11 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Slc17a6 Shox2 Neuron.Slc17a6.Shox2 peripeduncular nucleus & posterior intralaminar thalamic nucleus (PP & PIL)
493 SN_3-12 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Slc17a6 Nkx6-1 Neuron.Slc17a6.Nkx6-1 SN/VTA (SNr)
494 SN_3-13 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Gad1Gad2 Sema3e Neuron.Gad1Gad2.Sema3e SN/VTA (SNr)
495 SN_3-14 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Gad1Gad2 Ttn Neuron.Gad1Gad2.Ttn red nucleus, magnocellular/parvicellular (RMC/RPC)
496 SN_3-15 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Slc17a6 C1ql2 Neuron.Slc17a6.C1ql2 red nucleus, magnocellular/parvicellular (RMC/RPC)
497 SN_3-16 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Gad1Gad2 Gad2-Kcnc3 Neuron.Gad1Gad2.Gad2-Kcnc3 GABAergic, K/Na Channel State
498 SN_3-17 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Gad1Gad2 Sema3e-Kcng4 Neuron.Gad1Gad2.Sema3e-Kcng4 GABAergic, K Channel State, Sema3e+ SN/VTA (SNr)
499 SN_3-18 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Gad1Gad2 Pax5 Neuron.Gad1Gad2.Pax5 SN/VTA (SNr)
500 SN_3-19 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Gad1Gad2 Tmem132c Neuron.Gad1Gad2.Tmem132c SN/VTA (SNr)
501 SN_3-2 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Gad1Gad2 Otx2-Chrna3 Neuron.Gad1Gad2.Otx2-Chrna3 SN/VTA (dorsal SNr)
502 SN_3-3 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Gad1Gad2 Gad2 Neuron.Gad1Gad2.Gad2 generic SN/VTA GABAergic neuron
503 SN_3-4 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Gad1Gad2 Ndnf Neuron.Gad1Gad2.Ndnf medial geniculate nucleus, ventral part (MGV)? Or State? 
504 SN_3-5 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Gad1Gad2 Rln3 Neuron.Gad1Gad2.Rln3 parabrachial pigmented nucleus (PBP)
505 SN_3-6 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Slc17a6 Tcf4 Neuron.Slc17a6.Tcf4 Supramammillary Nucleus (SuM)
506 SN_3-7 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Slc17a6-Gad2-Th Crhbp Neuron.Slc17a6-Gad2-Th.Crhbp  Supramammillary Nucleus (SuM) Dopaminergic?, Th+/Ddc+
507 SN_3-8 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Gad1Gad2 Fos Neuron.Gad1Gad2.Gad2-Fos IEG state, GABAergic 
508 SN_3-9 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Slc17a6 Nts Neuron.Slc17a6.Nts peripeduncular nucleus & posterior intralaminar thalamic nucleus (PP & PIL)
509 SN_4-1 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Th-Slc17a6 Lpl Neuron.Th-Slc17a6-Lpl VTA (ventral VTA)
510 SN_4-2 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Th Cbln1 Neuron.Th.Cbln1 VTA (dorsal VTA)
511 SN_4-3 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Th Cyp26b1 Neuron.Th.Cyp26b1 SNc/VTA
512 SN_4-4 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Th C1ql3 Neuron.Th.C1ql3 VTA (dorsal VTA)
513 SN_4-5 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Th Vcan Neuron.Th.Vcan SNc
514 SN_4-6 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Th Cadm2 Neuron.Th.Cadm2 Cadm2 state
515 SN_4-7 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Th Nefm Neuron.Th.Nefl Neurofilament state
516 SN_4-8 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Th Anxa1 Neuron.Th.Aldh1a1 SNc/VTA
517 SN_4-9 Substantia nigra & Ventral tegmental area Neuron Substantia nigra & Ventral tegmental area Th Grin2c Neuron.Th.Grin2c SNc
518 TH_11-1 Thalamus Astrocyte Gja1 Myoc Astrocyte.Gja1.Myoc Astrocyte.Gja1.Myoc
519 TH_11-2 Thalamus Astrocyte Gja1 Vegfa Astrocyte.Gja1.Vegfa Astrocyte.Gja1.Vegfa
520 TH_4-1 Thalamus Endothelial_Stalk Flt1 Gkn3 Endothelial_Stalk.Flt1.Gkn3 Endothelial_Stalk.Flt1.Gkn3
521 TH_4-2 Thalamus Endothelial_Stalk Flt1 Pi16 Endothelial_Stalk.Flt1.Pi16 Endothelial_Stalk.Flt1.Pi16
522 TH_4-3 Thalamus Endothelial_Stalk Flt1 Car4 Endothelial_Stalk.Flt1.Car4 Endothelial_Stalk.Flt1.Car4
523 TH_4-4 Thalamus Endothelial_Stalk Flt1 Vwf Endothelial_Stalk.Flt1.Vwf Endothelial_Stalk.Flt1.Vwf
524 TH_6-1 Thalamus Endothelial_Tip Dcn Dcn Endothelial_Tip.Dcn Endothelial_Tip.Dcn
525 TH_6-2 Thalamus Endothelial_Tip Dcn Dcn.Nenf Endothelial_Tip.Dcn.Nenf Endothelial_Tip.Dcn.Nenf
526 TH_10-1 Thalamus Ependymal Ccdc153 NA Ependymal.Ccdc153 Ependymal.Ccdc153
527 TH_7-1 Thalamus Macrophage C1qb Mrc1 Macrophage.C1qb.Mrc1 Resident macrophage
528 TH_7-2 Thalamus Microglia C1qb Tmem119 Microglia.C1qb.Tmem119 Microglia.C1qb.Tmem119
529 TH_5-1 Thalamus Mural Rgs5Acta2 Cnn1 Mural.Rgs5Acta2.Cnn1 Mural.Rgs5Acta2.Cnn1
530 TH_5-2 Thalamus Mural Rgs5Acta2 Car4 Mural.Rgs5Acta2.Car4 Mural.Rgs5Acta2.Car4
531 TH_8-1 Thalamus Oligodendrocyte Trf Klk6 Oligodendrocyte.Trf.Klk6 Oligodendrocyte.Trf.Klk6
532 TH_8-2 Thalamus Oligodendrocyte Trf Il33 Oligodendrocyte.Trf.Il33 Oligodendrocyte.Trf.Il33
533 TH_8-3 Thalamus Oligodendrocyte Trf Ctps Oligodendrocyte.Trf.Ctps Oligodendrocyte.Trf.Ctps
534 TH_8-4 Thalamus Oligodendrocyte Trf Ndrg2 Oligodendrocyte.Trf.Ndrg2 Oligodendrocyte.Trf.Ndrg2
535 TH_9-1 Thalamus Oligodendrocyte Trf Ndrg2 Oligodendrocyte.Trf.Ndrg2 Oligodendrocyte.Trf.Ndrg2
536 TH_12-1 Thalamus Polydendrocyte Tnr Pdgfa Polydendrocyte.Tnr.Pdgfa Polydendrocyte.Tnr.Pdgfa
537 TH_12-2 Thalamus Polydendrocyte Tnr Ctps Polydendrocyte.Tnr.Ctps Polydendrocyte.Tnr.Ctps
538 TH_12-3 Thalamus Polydendrocyte Tnr Bmp4 Polydendrocyte.Tnr.Bmp4 Polydendrocyte.Tnr.Bmp4
539 TH_12-4 Thalamus Polydendrocyte Tnr Cspg5 Polydendrocyte.Tnr.Cspg5 Polydendrocyte.Tnr.Cspg5
540 TH_1-1 Thalamus Neuron Thalamus Slc17a7 Tac2.Chat Neuron.Slc17a7.Tac2.Chat Habenular cholinergic cells
541 TH_1-2 Thalamus Neuron Thalamus Slc17a7 Tac2.Syt15 Neuron.Slc17a7.Tac2.Syt15 Medial habenula
542 TH_1-3 Thalamus Neuron Thalamus Slc17a7 Tac2.Wif1 Neuron.Slc17a7.Tac2.Wif1 Medial habenular, lateral portion
543 TH_1-4 Thalamus Neuron Thalamus Slc17a7 Tac2.Htr2c Neuron.Slc17a7.Tac2.Htr2c Lateral habenula
544 TH_2-1 Thalamus Neuron Thalamus Slc17a6 Rora.Atp2b4 Neuron.Slc17a6.Rora.Atp2b4 Lateral Geniculate Nucleus (LGN)
545 TH_2-10 Thalamus Neuron Thalamus Slc17a6 Rora.Cacng4 Neuron.Slc17a6.Rora.Cacng4 Non-anterior nuclei
546 TH_2-11 Thalamus Neuron Thalamus Slc17a6 Rora.Pvalb Neuron.Slc17a6.Rora.Pvalb Non-anterior nuclei
547 TH_2-2 Thalamus Neuron Thalamus Slc17a6 Rora.Nptxr Neuron.Slc17a6.Rora.Nptxr Reuniens thalamic nucleus?
548 TH_2-3 Thalamus Neuron Thalamus Slc17a6 Rora.Calca Neuron.Slc17a6.Rora.Calca Parafasicular nucleus (PF)
549 TH_2-4 Thalamus Neuron Thalamus Slc17a6 Rora.Nrp2 Neuron.Slc17a6.Rora.Nrp2 Anterior thalamus
550 TH_2-5 Thalamus Neuron Thalamus Slc17a6 Rora.C1ql2 Neuron.Slc17a6.Rora.C1ql2 Anterodorsal thalamic nucleus
551 TH_2-6 Thalamus Neuron Thalamus Slc17a6 Rora.Fgf10 Neuron.Slc17a6.Rora.Fgf10 Lateral dorsal thalamic nuclei (LD)
552 TH_2-7 Thalamus Neuron Thalamus Slc17a6 Rora.Lypd6 Neuron.Slc17a6.Rora.Lypd6 Parafasicular nucleus (PF)
553 TH_2-8 Thalamus Neuron Thalamus Slc17a6 Rora.Cbln2 Neuron.Slc17a6.Rora.Cbln2 Neuron.Slc17a6.Rora.Cbln2
554 TH_2-9 Thalamus Neuron Thalamus Slc17a6 Rora.Lrrtm2 Neuron.Slc17a6.Rora.Lrrtm2 Cadm2 state
555 TH_3-1 Thalamus Neuron Thalamus Gad1Gad2 Six3-Adcy1 Neuron.Gad1Gad2.Six3-Adcy1 Reticular formation
556 TH_3-10 Thalamus Neuron Thalamus Slc17a6 Ebf1 Neuron.Slc17a6.Ebf1 Anterior pretectal nucleus (APT)
557 TH_3-11 Thalamus Neuron Thalamus Gad1Gad2 Ttn Neuron.Gad1Gad2.Ttn Neuron.Gad1Gad2.Ttn
558 TH_3-2 Thalamus Neuron Thalamus Gad1Gad2 Six3-Sst Neuron.Gad1Gad2.Six3-Sst Reticular formation
559 TH_3-3 Thalamus Neuron Thalamus Gad1Gad2 Pou6f2-Pax6 Neuron.Gad1Gad2.Pou6f2-Pax6 Zona incerta (ZI)
560 TH_3-4 Thalamus Neuron Thalamus Slc17a6 Pitx2 Neuron.Slc17a6.Pitx2 Subthalamic nucleus (STN)
561 TH_3-5 Thalamus Neuron Thalamus Gad1Gad2 Chrnb3 Neuron.Gad1Gad2.Chrnb3 interneuron, Lateral Geniculate Nucleus  (LGN)
562 TH_3-6 Thalamus Neuron Thalamus Gad1Gad2 Gata3 Neuron.Gad1Gad2.Gata3 Periacqueductal gray (PAG) (or adjacent APTD)
563 TH_3-7 Thalamus Neuron Thalamus Slc17a6-Gad1Gad2 Asb4 Neuron.Slc17a6-Gad1Gad2.Asb4 Periventricular Fiber System (Pv)
564 TH_3-8 Thalamus Neuron Thalamus Gad1Gad2 Col25a1 Neuron.Gad1Gad2.Col25a1 Neuron.Gad1Gad2.Col25a1
565 TH_3-9 Thalamus Neuron Thalamus Slc17a6 Nrgn Neuron.Slc17a6.Nrgn Habenula (inferomedial and lateral)